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The map label for this gene is capA [H]

Identifier: 118480320

GI number: 118480320

Start: 5038310

End: 5039089

Strand: Reverse

Name: capA [H]

Synonym: BALH_4782

Alternate gene names: 118480320

Gene position: 5039089-5038310 (Counterclockwise)

Preceding gene: 118480321

Following gene: 118480319

Centisome position: 95.85

GC content: 34.1

Gene sequence:

>780_bases
TTGTTATGTGCAAATTTTAGAAAGTTGGAGGAACTTATGGAAGAAACAATTAGTTTGAAAGAGTTATTTCATATTTTAAA
AAAACGTTTAGCAATGATCCTCGTAATCGCCTTTGGTGCAGCTATTGTAAGTGCTATCATTAGCTTCTTCTTTATGACAC
CAATCTATCAATCTTCTACGCAAATTCTTGTGAATCAGAAGAAACAAGAGGGATCGATGTTTCAAGCTGGTGAAGTTCAA
ACGAATATTCAATTAACGAATACATATAAGGTTATTATTAAAAGTCCAGTAATCTTAGAACAAGTAAATGAAAAATTAAA
TTTAAATATGACAGCGCAAGCGTTAACGAAGAAGATTAATGTTGCGAATGAAAAAGATTCACAAGTCATTTCTGTAACAG
CTGAGGATAAAGATCCAAAAGTAGCTCGTGATATTGCAAATGCTACTGCAGATGTATTTAAAGGTGAAGTTGCAAAAATT
ATGAACGTGGATAACGTAACGGTATTATCGAAAGCAGAAGTTGCAGAAAATCAATCTCCAATTAAACCACGCCCAATGTT
AAATGTAGCAATTGCCTTCGTTGTTGGCTTAATGGCTTCAGTTGGTCTTGCATTCTTACTAGAATACTTAGACAATACAG
TGAAAAAAGAAGAAGATGTAGAAAACTTACTTGGTTTACCGGTTTTAGGTATTGTAGCTCGTATGGATGAAGAAACAATG
AACGTGAAATCACACGCTCCATCATCAAGAAAAGTGAGGGGACAAACAATTGGCTCTTAA

Upstream 100 bases:

>100_bases
CATATTTAAGATTATTTTGTAAGATTATATATGTTTTTAAATAACAATCGTACATAGATATTACTAAAATAAAAAAATGT
AAGATTATATGTTATAATTT

Downstream 100 bases:

>100_bases
TTTATTTAAAAAGAAAAAAAATCATCGTCAACGTCGTCAATTAATTGCTCATCAACAACCAAAATCACCAATTTCAGAAC
AATATCGTAATATTCGAACG

Product: capsular polysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLCANFRKLEELMEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGSMFQAGEVQ
TNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISVTAEDKDPKVARDIANATADVFKGEVAKI
MNVDNVTVLSKAEVAENQSPIKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETM
NVKSHAPSSRKVRGQTIGS

Sequences:

>Translated_259_residues
MLCANFRKLEELMEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGSMFQAGEVQ
TNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISVTAEDKDPKVARDIANATADVFKGEVAKI
MNVDNVTVLSKAEVAENQSPIKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETM
NVKSHAPSSRKVRGQTIGS
>Mature_259_residues
MLCANFRKLEELMEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGSMFQAGEVQ
TNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKINVANEKDSQVISVTAEDKDPKVARDIANATADVFKGEVAKI
MNVDNVTVLSKAEVAENQSPIKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETM
NVKSHAPSSRKVRGQTIGS

Specific function: Required for YwqD kinase activity. May bring YwqD and its substrates into contact. Probably involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 28553; Mature: 28553

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCANFRKLEELMEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QILVNQKKQEGSMFQAGEVQTNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKIN
HHHHCCCHHCCCCEECCCCEEEEEEECCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH
VANEKDSQVISVTAEDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKAEVAENQSP
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCC
IKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
NVKSHAPSSRKVRGQTIGS
HHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLCANFRKLEELMEETISLKELFHILKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSST
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
QILVNQKKQEGSMFQAGEVQTNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQALTKKIN
HHHHCCCHHCCCCEECCCCEEEEEEECCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHH
VANEKDSQVISVTAEDKDPKVARDIANATADVFKGEVAKIMNVDNVTVLSKAEVAENQSP
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCC
IKPRPMLNVAIAFVVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
NVKSHAPSSRKVRGQTIGS
HHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]