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The map label for this gene is yhcS [H]

Identifier: 118480256

GI number: 118480256

Start: 4958251

End: 4959069

Strand: Reverse

Name: yhcS [H]

Synonym: BALH_4714

Alternate gene names: 118480256

Gene position: 4959069-4958251 (Counterclockwise)

Preceding gene: 118480257

Following gene: 118480252

Centisome position: 94.33

GC content: 35.53

Gene sequence:

>819_bases
ATGAAACGTAATATTATTTTTGGATGCATCTTTTTAGTAGGACTTAGTATTTTTTTATACCCGACGGTAAGTAATTGGTT
AGCGACAAGAGCGCATTATTCTGAAGTAAGTACATATGACAAAAAGGTGAAAGAGTTGCAAAGAGAAGAGATTAAACGTA
AAGAAAAAGAAGCGAAAGAGTACAATGAGAAACTGCAACATGAGAGACAGACCGTTACAGATCCATTTAGTTCCGATAAA
AGTGGAAATTCTAGTTCTTACGTAGATATGCTGAATGTAGGAGAAGTAATGGGCTATGTAGAAATTCCTAAAATTAATGT
GAAGCTTCCTATATATCACGGAACGTCTGAGGATGTTTTAAGTAGAGGGGTAGGTCATATAGAGAATTCCTCTTTGCCAG
TTGGCGGGAAAGGAACACATTCTATTTTGACTGGACATAGGGGGTTACCATCTGCTGTACTATTTACAGATTTGGATAAA
TTAAAAGAGGCGGATGTTTTTTATATTCATTCTTTAGATAAAGTATTAGCATATAAAGTAGATCAAATTAAAGTGGTGCT
ACCAGAAGAAACGGATGATTTAACAGTAGCTGAAAATGAAGATTATGTGACACTAATTACATGTACGCCATATGGTGTAA
ACACGCATAGGTTACTCGTTCGAGGACACCGTGTTCCATATGAGGAAAAGGAAAAAGAAGAGATTAAGGAAGTTGTTGGA
GTAGATAAACGAATGATAGGAGCAGGTGCCATCATTGTAGGGGCATTTCTAGTTGCTTTATATAGAAGAAAGAAGCGTAA
AACTATAGAGAAAATATAA

Upstream 100 bases:

>100_bases
GAGAAAAGAGGGAGAAAGAACATCTTCCTCTTTTCGTTATTTACCGTCCGGTAAATAGCGGGATAAATGGAACTACATAT
GCATAATAAAGGGGTATATT

Downstream 100 bases:

>100_bases
AATGGTTCTCCTTTCAATGTATATGTATGAAAGGAGAACCATTTTTTGGCCTGTTATTTGCGTTCCATTACCGCAAAGTA
ATTGTTTTCATTATCAGCAA

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKRNIIFGCIFLVGLSIFLYPTVSNWLATRAHYSEVSTYDKKVKELQREEIKRKEKEAKEYNEKLQHERQTVTDPFSSDK
SGNSSSYVDMLNVGEVMGYVEIPKINVKLPIYHGTSEDVLSRGVGHIENSSLPVGGKGTHSILTGHRGLPSAVLFTDLDK
LKEADVFYIHSLDKVLAYKVDQIKVVLPEETDDLTVAENEDYVTLITCTPYGVNTHRLLVRGHRVPYEEKEKEEIKEVVG
VDKRMIGAGAIIVGAFLVALYRRKKRKTIEKI

Sequences:

>Translated_272_residues
MKRNIIFGCIFLVGLSIFLYPTVSNWLATRAHYSEVSTYDKKVKELQREEIKRKEKEAKEYNEKLQHERQTVTDPFSSDK
SGNSSSYVDMLNVGEVMGYVEIPKINVKLPIYHGTSEDVLSRGVGHIENSSLPVGGKGTHSILTGHRGLPSAVLFTDLDK
LKEADVFYIHSLDKVLAYKVDQIKVVLPEETDDLTVAENEDYVTLITCTPYGVNTHRLLVRGHRVPYEEKEKEEIKEVVG
VDKRMIGAGAIIVGAFLVALYRRKKRKTIEKI
>Mature_272_residues
MKRNIIFGCIFLVGLSIFLYPTVSNWLATRAHYSEVSTYDKKVKELQREEIKRKEKEAKEYNEKLQHERQTVTDPFSSDK
SGNSSSYVDMLNVGEVMGYVEIPKINVKLPIYHGTSEDVLSRGVGHIENSSLPVGGKGTHSILTGHRGLPSAVLFTDLDK
LKEADVFYIHSLDKVLAYKVDQIKVVLPEETDDLTVAENEDYVTLITCTPYGVNTHRLLVRGHRVPYEEKEKEEIKEVVG
VDKRMIGAGAIIVGAFLVALYRRKKRKTIEKI

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 30798; Mature: 30798

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNIIFGCIFLVGLSIFLYPTVSNWLATRAHYSEVSTYDKKVKELQREEIKRKEKEAKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNEKLQHERQTVTDPFSSDKSGNSSSYVDMLNVGEVMGYVEIPKINVKLPIYHGTSEDVL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCEEEEEEEEEECCCHHHH
SRGVGHIENSSLPVGGKGTHSILTGHRGLPSAVLFTDLDKLKEADVFYIHSLDKVLAYKV
HHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
DQIKVVLPEETDDLTVAENEDYVTLITCTPYGVNTHRLLVRGHRVPYEEKEKEEIKEVVG
CEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCHHEEEEECCCCCCCHHHHHHHHHHHC
VDKRMIGAGAIIVGAFLVALYRRKKRKTIEKI
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRNIIFGCIFLVGLSIFLYPTVSNWLATRAHYSEVSTYDKKVKELQREEIKRKEKEAKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNEKLQHERQTVTDPFSSDKSGNSSSYVDMLNVGEVMGYVEIPKINVKLPIYHGTSEDVL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCEEEEEEEEEECCCHHHH
SRGVGHIENSSLPVGGKGTHSILTGHRGLPSAVLFTDLDKLKEADVFYIHSLDKVLAYKV
HHCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHH
DQIKVVLPEETDDLTVAENEDYVTLITCTPYGVNTHRLLVRGHRVPYEEKEKEEIKEVVG
CEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCHHEEEEECCCCCCCHHHHHHHHHHHC
VDKRMIGAGAIIVGAFLVALYRRKKRKTIEKI
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]