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The map label for this gene is arlR [H]

Identifier: 118480165

GI number: 118480165

Start: 4862940

End: 4863617

Strand: Reverse

Name: arlR [H]

Synonym: BALH_4620

Alternate gene names: 118480165

Gene position: 4863617-4862940 (Counterclockwise)

Preceding gene: 118480166

Following gene: 118480164

Centisome position: 92.52

GC content: 34.51

Gene sequence:

>678_bases
GTGAGGCAGGTGTTAGTAATTAAGAATGAACGGTCTTTAGCGAAGAAAATCGTAAGCGGTCTAACGCAAGAAGGCCATTT
CATTTTAAAACTTCACAATGAAAACGAAGGTTTAAATATAATATATGAACAAGATTGGGATATTATCATATTAGACTGGG
ATTCATTAAGCATATCCGGGCCAGAAATTTGCAGACAAATACGACTTGTTAAAATGACACCGATCATTATTGTTACCGAC
AATATTTCTAGTAAGGATTGCGTAGCAGGGTTACAAGCAGGAGCTGATGATTATATTAGAAAACCATTTGCGAAAGAAGA
ACTAGTAGCAAGGGTTCAAGCCATTTTAAGGAGAAGCGACTGTAACCAGCAAAATGAGACAACCTTTTATCAGTTTAAAG
ATCTCTTTGTTGATGCATCTAGCAATATTGTGAAAAAAGGTGGTAAAAATCTCTCGCTTACGAAGCGTGAGTACGATTTA
CTTGTATTTTTAATTAAGAATAAAAATACAATATTGAGCCGTGAAATGCTTTTGAACCAAGTTTGGGGACATAACGTAGT
CGTAAATCCAAATGTAGTAGACTTATATATTGGGTATGTAAGAAAAAAGTTAAAGTGTGAGAAGAAAAATAGATATATTC
AAACGATACATGGCAGAGGCTATTCAATGGTTGAATGA

Upstream 100 bases:

>100_bases
CTAATAAGCTGTTTGAATGGATTTTTAGGGGTTAAATATTTATAAGTCTTAAATAACTTTTTATTTAACTAAGTTATATT
GAAGTAGAGGTGAACCATCG

Downstream 100 bases:

>100_bases
TAAAAATAAGATAATAAAGTAGTTTCTGTGAAATATGAAAAGACAGAAACTATAAAAAGAAGATTGCTATCAGGAAATGG
TCATTTTTTTGCAGTAGAAA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MRQVLVIKNERSLAKKIVSGLTQEGHFILKLHNENEGLNIIYEQDWDIIILDWDSLSISGPEICRQIRLVKMTPIIIVTD
NISSKDCVAGLQAGADDYIRKPFAKEELVARVQAILRRSDCNQQNETTFYQFKDLFVDASSNIVKKGGKNLSLTKREYDL
LVFLIKNKNTILSREMLLNQVWGHNVVVNPNVVDLYIGYVRKKLKCEKKNRYIQTIHGRGYSMVE

Sequences:

>Translated_225_residues
MRQVLVIKNERSLAKKIVSGLTQEGHFILKLHNENEGLNIIYEQDWDIIILDWDSLSISGPEICRQIRLVKMTPIIIVTD
NISSKDCVAGLQAGADDYIRKPFAKEELVARVQAILRRSDCNQQNETTFYQFKDLFVDASSNIVKKGGKNLSLTKREYDL
LVFLIKNKNTILSREMLLNQVWGHNVVVNPNVVDLYIGYVRKKLKCEKKNRYIQTIHGRGYSMVE
>Mature_225_residues
MRQVLVIKNERSLAKKIVSGLTQEGHFILKLHNENEGLNIIYEQDWDIIILDWDSLSISGPEICRQIRLVKMTPIIIVTD
NISSKDCVAGLQAGADDYIRKPFAKEELVARVQAILRRSDCNQQNETTFYQFKDLFVDASSNIVKKGGKNLSLTKREYDL
LVFLIKNKNTILSREMLLNQVWGHNVVVNPNVVDLYIGYVRKKLKCEKKNRYIQTIHGRGYSMVE

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=34.0807174887892, Blast_Score=136, Evalue=9e-34,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=31.1111111111111, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=32.4324324324324, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=29.0178571428571, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1788394, Length=224, Percent_Identity=32.1428571428571, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI2367329, Length=172, Percent_Identity=34.8837209302326, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787229, Length=226, Percent_Identity=31.858407079646, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=28.1385281385281, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=30.1801801801802, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=28.6363636363636, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1790552, Length=223, Percent_Identity=29.1479820627803, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=25.6637168141593, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25927; Mature: 25927

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQVLVIKNERSLAKKIVSGLTQEGHFILKLHNENEGLNIIYEQDWDIIILDWDSLSISG
CCEEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCC
PEICRQIRLVKMTPIIIVTDNISSKDCVAGLQAGADDYIRKPFAKEELVARVQAILRRSD
HHHHHHHEEEEECEEEEEECCCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHC
CNQQNETTFYQFKDLFVDASSNIVKKGGKNLSLTKREYDLLVFLIKNKNTILSREMLLNQ
CCCCCCCHHEEEEEHEECCCCHHHHCCCCCCEEEEECEEEEEEEEECCCCHHHHHHHHHH
VWGHNVVVNPNVVDLYIGYVRKKLKCEKKNRYIQTIHGRGYSMVE
HCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MRQVLVIKNERSLAKKIVSGLTQEGHFILKLHNENEGLNIIYEQDWDIIILDWDSLSISG
CCEEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCC
PEICRQIRLVKMTPIIIVTDNISSKDCVAGLQAGADDYIRKPFAKEELVARVQAILRRSD
HHHHHHHEEEEECEEEEEECCCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHC
CNQQNETTFYQFKDLFVDASSNIVKKGGKNLSLTKREYDLLVFLIKNKNTILSREMLLNQ
CCCCCCCHHEEEEEHEECCCCHHHHCCCCCCEEEEECEEEEEEEEECCCCHHHHHHHHHH
VWGHNVVVNPNVVDLYIGYVRKKLKCEKKNRYIQTIHGRGYSMVE
HCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA