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The map label for this gene is fatD [H]

Identifier: 118480163

GI number: 118480163

Start: 4860543

End: 4861559

Strand: Reverse

Name: fatD [H]

Synonym: BALH_4618

Alternate gene names: 118480163

Gene position: 4861559-4860543 (Counterclockwise)

Preceding gene: 118480164

Following gene: 118480162

Centisome position: 92.48

GC content: 36.09

Gene sequence:

>1017_bases
GTGTCAAAAAATATAATTTCTAGGGTTGAGAATATTTCTCAACCCCAGTTTTATAATCACAATAAATTATGGACAAAACC
TTTTATAATAGCCATTATAGTTGTTATAATTTTAGGGATTATATCACTGTTTACTGGAGTTTATGATATACGTGGACAAG
AGGACGGGACAGAGATGTTTTTCATAACTCGTGTTCCGAGAACAGCTGCATTAATGCTTACTGGAGCTGCGATGGCGATG
GCAGGGCTCGTAATGCAACTCATTACACAGAATCGCTTTGTTGAACCTACTACAACGGGGACTATTGAATGGTCAGGCTT
AGGCCTGCTTTTTGTGTATTTATTATTTCCTGCCCCGACTTTAGTTCAAAGAATGACTGGTGCAATCATTTTTTCTTTTA
TAGGAACTATGATTTTCTTTCTATTTTTAAGAAGAGTTAAGCTTCGTTCGTCTTTAATTGTTCCGATTATTGGATTGATG
CTTGGAGCAGTAATTTCTGCAGTGTCTACTTTTTTAGGACTCCTTTTTCAAAAGACGCAAAGTATTGAAACTTGGTTTGT
AGGTTCATTTGCTAACATTCAGGTGGGAAGATATGAATATTTATGGCTGATTGTTATCATTACTTTTCTTATTTTTATGT
ATGCGAATAGATTGACTTTAGCTGGACTAGGAGAAGATGTCGCAACAAGTCTTGGAGTTAATTACAATAGAATTGTTCTT
TTTGGGACTGCTCTTATCTCTGTTGCAGTTGGAATTGTTGCAGCTGTTATTGGACACTTACCTTTCTTAGGATTAATTGT
GCCAAATATCGTTTCCATGTTTAGAGGTGATGATCTTAGGAGTAATTTACCTTGGGTTTGTGTCATCGGAATGGGATCAA
TAACTGCCTGTGACATCATTTCTCGAACAATTATTCAGCCTTTTGAATTACCTGTTTCTTTAATACTTGCAACAGTGGGA
GCAGTCGTGTTTATTACTATTTTATTGAGACAAAGAAAACCAAGGAGGCTACGATGA

Upstream 100 bases:

>100_bases
CCAGAAGATACTTACACAAATGAATCAATTCAAACTTATATAGAGTTATTTGGAAATATGGCAAAAACTTTAGCTAAGTA
GTGTAAAGGAGTACGAAACA

Downstream 100 bases:

>100_bases
TCACATTAGAATATAGAAAAAAAGAAAATGTCGAAATCGATTCTAGCCTTCATAATGAAAGTAGATCAGCTAGCGCTTTT
CGGTCTAAGAAGGAAGCAAG

Product: iron compound ABC transporter permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MSKNIISRVENISQPQFYNHNKLWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGTEMFFITRVPRTAALMLTGAAMAM
AGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLM
LGAVISAVSTFLGLLFQKTQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRIVL
FGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACDIISRTIIQPFELPVSLILATVG
AVVFITILLRQRKPRRLR

Sequences:

>Translated_338_residues
MSKNIISRVENISQPQFYNHNKLWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGTEMFFITRVPRTAALMLTGAAMAM
AGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLM
LGAVISAVSTFLGLLFQKTQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRIVL
FGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACDIISRTIIQPFELPVSLILATVG
AVVFITILLRQRKPRRLR
>Mature_337_residues
SKNIISRVENISQPQFYNHNKLWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGTEMFFITRVPRTAALMLTGAAMAMA
GLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPTLVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLML
GAVISAVSTFLGLLFQKTQSIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRIVLF
GTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACDIISRTIIQPFELPVSLILATVGA
VVFITILLRQRKPRRLR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG4606

COG function: function code P; ABC-type enterochelin transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=31.9298245614035, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790740, Length=331, Percent_Identity=26.8882175226586, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1790741, Length=279, Percent_Identity=24.7311827956989, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786805, Length=301, Percent_Identity=26.9102990033223, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37443; Mature: 37311

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNIISRVENISQPQFYNHNKLWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGTEMF
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
FITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPT
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCHH
LVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQKTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRIVL
CHHHHEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHCCCCCHHHH
FGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACDII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
SRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKNIISRVENISQPQFYNHNKLWTKPFIIAIIVVIILGIISLFTGVYDIRGQEDGTEMF
CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
FITRVPRTAALMLTGAAMAMAGLVMQLITQNRFVEPTTTGTIEWSGLGLLFVYLLFPAPT
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHCCHH
LVQRMTGAIIFSFIGTMIFFLFLRRVKLRSSLIVPIIGLMLGAVISAVSTFLGLLFQKTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIETWFVGSFANIQVGRYEYLWLIVIITFLIFMYANRLTLAGLGEDVATSLGVNYNRIVL
CHHHHEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHCCCCCHHHH
FGTALISVAVGIVAAVIGHLPFLGLIVPNIVSMFRGDDLRSNLPWVCVIGMGSITACDII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHH
SRTIIQPFELPVSLILATVGAVVFITILLRQRKPRRLR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]