| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118480159
Identifier: 118480159
GI number: 118480159
Start: 4856169
End: 4857128
Strand: Reverse
Name: 118480159
Synonym: BALH_4613
Alternate gene names: NA
Gene position: 4857128-4856169 (Counterclockwise)
Preceding gene: 118480161
Following gene: 118480158
Centisome position: 92.39
GC content: 33.75
Gene sequence:
>960_bases ATGATTGTGAAAGAACGACAAATGCCAATTTATTTACGGCAATTAGAAGCGCTATCCAGAAGATTACCTGCTCACCATCC GAAGCGGGATATGGTTGTAGAAAGTTTAGTGAAACATAAAGCAGGTTACAAAGGTGAACAAGCTATCAATTATCCACTAA GTTTTTTGCCGGAAGAAACATATAGTATTTTGCACGATATAAGGTTGTTTGATCAAAATCACCATTTTCAAATTGATACG ATTATCATTTCAGCATATTTTCTTCTTCTCCTCGAAATAAAAAATATAGCAGGTACGTTACTATTTGATTCAAAGTTTAA TCAGCTTATTAGAATATCAGAGGGGAATTCAGAAGGATTTCCAGATCCGATTTTACAAGTGAAAAGACAAGAGGAACAGT TTAGAAAATGGTTAAGTTTAAATGGGTTTTCTCGTTTTCCGATTGAATCACTCGTTGTTATTAGTAATCCACGAACTATT ATTAAAGCTTCAGACGATAATCTCCCTAATAAAATTATCCACAGTGCAAATTTACCTCATAAAATAAAATGGTTTGAGAG TAAATATAAGAAAAAAACTATAAAAAATGTAGACGATCTTATTTGTCAAATAGTAAGGAATCATACTCCATTACAGCAAA ATATCCTCGAACAATTTAAAATCAAAAAAGGAGAATTGTTAAACGGCGTACGATGTGAGGTGTGCTCTATAATGCCGATG TTGAAATTAAAAAAGGGGTGGTATTGTTCAAATTGTAAAGCTATCTCTAAAGTAGCACATGAGGATACGATACATGATTA TGTACTTCTTATTAGTAGGACTTGTACAAATATGCAGTTAAAGGAATTTCTCCACGTTCAATCGAGTGCAACAGTTCATA GGCTCCTCAAAACAATGAACATCCCCCATACCGGCACCAACAAAGGGCGGAAATATGATTTAACCCACCTCCAATTATAA
Upstream 100 bases:
>100_bases CTCTGTCGAATCGTTGATATATTGAAAAAATCGTTGATATATTGTGAGTTATGATAGATATATTTGAAAAATCGTTGATA TATTTTGAGGAGGACTAAAG
Downstream 100 bases:
>100_bases TTTTGTTATAATAAATAAGTACCTACACGAAGGGGAGCTAAAAGAAAACATGAAGTCGTTTAATATTGATCATTTTATTG CGAGTGTTTTACAGTGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NERD Domain-Containing Protein; Nerd Domain-Containing Protein; NERD Domain Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEETYSILHDIRLFDQNHHFQIDT IIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGFPDPILQVKRQEEQFRKWLSLNGFSRFPIESLVVISNPRTI IKASDDNLPNKIIHSANLPHKIKWFESKYKKKTIKNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM LKLKKGWYCSNCKAISKVAHEDTIHDYVLLISRTCTNMQLKEFLHVQSSATVHRLLKTMNIPHTGTNKGRKYDLTHLQL
Sequences:
>Translated_319_residues MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEETYSILHDIRLFDQNHHFQIDT IIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGFPDPILQVKRQEEQFRKWLSLNGFSRFPIESLVVISNPRTI IKASDDNLPNKIIHSANLPHKIKWFESKYKKKTIKNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM LKLKKGWYCSNCKAISKVAHEDTIHDYVLLISRTCTNMQLKEFLHVQSSATVHRLLKTMNIPHTGTNKGRKYDLTHLQL >Mature_319_residues MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEETYSILHDIRLFDQNHHFQIDT IIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGFPDPILQVKRQEEQFRKWLSLNGFSRFPIESLVVISNPRTI IKASDDNLPNKIIHSANLPHKIKWFESKYKKKTIKNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM LKLKKGWYCSNCKAISKVAHEDTIHDYVLLISRTCTNMQLKEFLHVQSSATVHRLLKTMNIPHTGTNKGRKYDLTHLQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37130; Mature: 37130
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50965 NERD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEET CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHCCHHH YSILHDIRLFDQNHHFQIDTIIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGF HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCHHCCEEEEECCCCCCC PDPILQVKRQEEQFRKWLSLNGFSRFPIESLVVISNPRTIIKASDDNLPNKIIHSANLPH CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHCCCCCH KIKWFESKYKKKTIKNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHH LKLKKGWYCSNCKAISKVAHEDTIHDYVLLISRTCTNMQLKEFLHVQSSATVHRLLKTMN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCC IPHTGTNKGRKYDLTHLQL CCCCCCCCCCEECCCEECC >Mature Secondary Structure MIVKERQMPIYLRQLEALSRRLPAHHPKRDMVVESLVKHKAGYKGEQAINYPLSFLPEET CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCHHHCCHHH YSILHDIRLFDQNHHFQIDTIIISAYFLLLLEIKNIAGTLLFDSKFNQLIRISEGNSEGF HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHEEECCHHCCEEEEECCCCCCC PDPILQVKRQEEQFRKWLSLNGFSRFPIESLVVISNPRTIIKASDDNLPNKIIHSANLPH CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHCCCCCH KIKWFESKYKKKTIKNVDDLICQIVRNHTPLQQNILEQFKIKKGELLNGVRCEVCSIMPM HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHHHH LKLKKGWYCSNCKAISKVAHEDTIHDYVLLISRTCTNMQLKEFLHVQSSATVHRLLKTMN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCC IPHTGTNKGRKYDLTHLQL CCCCCCCCCCEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA