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The map label for this gene is ybfM [H]

Identifier: 118480116

GI number: 118480116

Start: 4802850

End: 4803536

Strand: Reverse

Name: ybfM [H]

Synonym: BALH_4567

Alternate gene names: 118480116

Gene position: 4803536-4802850 (Counterclockwise)

Preceding gene: 118480122

Following gene: 118480114

Centisome position: 91.37

GC content: 34.79

Gene sequence:

>687_bases
GTGATAGTTATTTCGACAATTTTTTTATACAATATTAGTAAGAAGTTGCACGTGATTGAAAGGAGAGATGACATGGAATG
GATTCATGAATTATTTCAGCAATACGGGTACTATGTTGTACTTGTCGGCTTGCTGTTAGAATATATTGCACTTCCGTTTC
CGGGAGAGCCAACGTTAGCATATGCGGGATTTTTAGCACATAAAGGTGATTTAAGTTTACCGATTTTAATTATTCTATCC
TTTATTGGGACAAGTGTAGGAATGACGATTCAATACTTTTTAGGAAATAAATTAGGTATGCCCTTTATTCAAAAGTATGG
GAAATACGTATTTTTAACACAAAGAAAAATCGACTTAACAAGAATGTGGTTTGATAAGTATGGATATTTCCTAATTTTTA
TCGGTTTCTTTATTCCTGGCGTACGTCACTTTACAGGGTACTTTGCAGGGATTATTAACTTACCATTCCGCCGTTTTGCG
ATTACAATTTACTCAGGTGCTCTATTTTGGGTATCATTCTTCTTAATCGGTGGTTACTGGTTAGGTGGCAACTTACATGA
TATTTTTGGAGTGCTAGAAGGTCATATCGGTAAAATCATTTTTGGAGTGATTGTGATTGTAGCAATTACGTTAGGAGTTC
GTTTCCGTAAACAGTTAAAACGAGCATTATTACAAAACGCAAGTTAA

Upstream 100 bases:

>100_bases
CACGTTATATACTTGTTAAGTTGTCTGAAAATGAAAGTAAATAAAGAACGTAAAAGTTTAGTGAGAGCCTTACAAAAATG
TAATAAAAATGTAAGCTATT

Downstream 100 bases:

>100_bases
GATGGAATCCATTCTATGTCAGAATTTAGGAAGGCAGTGCAAAAGCACTGCCTTTTTTATTTTATGTTCCAATCGATTTT
TAACTTTCCTTTTGATTGAT

Product: DedA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIVISTIFLYNISKKLHVIERRDDMEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILS
FIGTSVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFA
ITIYSGALFWVSFFLIGGYWLGGNLHDIFGVLEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS

Sequences:

>Translated_228_residues
MIVISTIFLYNISKKLHVIERRDDMEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILS
FIGTSVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFA
ITIYSGALFWVSFFLIGGYWLGGNLHDIFGVLEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS
>Mature_228_residues
MIVISTIFLYNISKKLHVIERRDDMEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLAYAGFLAHKGDLSLPILIILS
FIGTSVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLTRMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFA
ITIYSGALFWVSFFLIGGYWLGGNLHDIFGVLEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=185, Percent_Identity=28.6486486486486, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26191; Mature: 26191

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVISTIFLYNISKKLHVIERRDDMEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLA
CEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHH
YAGFLAHKGDLSLPILIILSFIGTSVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECHHHHH
RMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGGNLHDIFGVLEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIVISTIFLYNISKKLHVIERRDDMEWIHELFQQYGYYVVLVGLLLEYIALPFPGEPTLA
CEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHH
YAGFLAHKGDLSLPILIILSFIGTSVGMTIQYFLGNKLGMPFIQKYGKYVFLTQRKIDLT
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECHHHHH
RMWFDKYGYFLIFIGFFIPGVRHFTGYFAGIINLPFRRFAITIYSGALFWVSFFLIGGYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGGNLHDIFGVLEGHIGKIIFGVIVIVAITLGVRFRKQLKRALLQNAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]