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The map label for this gene is sufB [H]

Identifier: 118480063

GI number: 118480063

Start: 4749645

End: 4751042

Strand: Reverse

Name: sufB [H]

Synonym: BALH_4511

Alternate gene names: 118480063

Gene position: 4751042-4749645 (Counterclockwise)

Preceding gene: 118480064

Following gene: 118480060

Centisome position: 90.37

GC content: 40.49

Gene sequence:

>1398_bases
ATGGCGAAGCAACTGCCAGATATCGGCGATTATAAATATGGTTTCAAAGACAAAGACGTTTCGATTTTCCGTGCTGGACG
CGGTTTAACAAAAGAGATCGTTGAAGAAATTTCACGTATGAAAGAAGAACCACAGTGGATGTTAGACTTCCGTTTAAAAT
CACTGGATAAGTTCTACGAAATGCCAATGCCACAATGGGGCGGCGACTTAAACGACTTAGATTTCGATGAAATTACGTAC
TACGTAAAACCATCTGAGAAATCTGAGAAGTCTTGGGATGAAGTACCTGATGAAATTAAAGCAACATTTGATAAATTAGG
TATTCCAGAAGCTGAGCAAAAGTATTTAGCTGGTGTATCTGCACAGTACGAATCTGAAGTTGTATACCACAACATGAAAG
AAGACCTAGAAGCTCTAGGAATCGTCTTCAAAGATACAGATAGCGCATTAAAAGAGAACGAAGATATTTTCCGTGAGCAT
TTCGGAAAAGTAATCCCACCAACAGACAACAAATTCTCTGCATTAAACTCTGCAGTTTGGTCTGGTGGATCATTCATCTA
CGTTCCAAAAGGTGTGAAAGTTGATACACCACTTCAAGCGTATTTCCGAATTAACTCTGAAAATATGGGACAATTCGAGC
GTACGCTTATCATCGTAGACGAAGGCGCACACGTACACTACGTAGAAGGTTGTACAGCACCTGTTTACACGACTAACTCA
CTTCACAGTGCGGTAGTAGAAATCATCATTAAGAAAGATGCATATTGCCGTTATACAACAATCCAAAACTGGGCGAACAA
CGTATACAACCTAGTTACAAAACGTGCGGTTTGTGAAGAAAACGCAACGATGGAATGGATTGACGGTAACATCGGATCTA
AATTAACGATGAAATACCCAGCAGTTATCTTAAAAGGCGAAGGCGCTCGTGGTTTAACATTATCTATCGCGATTGCTGGT
AAAGGCCAACACCAAGATGCTGGTGCGAAAATGATTCACTTAGCACCAAACACATCTTCAACAATCGTTTCTAAATCGAT
TGCGAAGCATGGTGGTAAAGTAACTTACCGTGGTATCGTACACTTCGGACCAAAAGCGAAAAACTCTCGCTCTAACATCG
AGTGTGACACGTTAATCATGGATAACCAATCTACATCTGATACAATTCCTTACAACGAAATCAAAAACGATTACGTTTCA
CTTGAGCACGAAGCGAAAGTATCGAAAGTATCAGAAGAACAATTATTCTACCTAATGAGCCGCGGTATTTCTGAGCAAGA
AGCTACAGAAATGATCGTAATGGGCTTCATCGAGCCATTCACTCGCGAACTTCCAATGGAATACGCAGTTGAAATGAACC
GCCTAATCAAGTTTGAGATGGAAGGTTCTATTGGTTAA

Upstream 100 bases:

>100_bases
TGCAACATTAGCGTGGAAAGCGTTAGAAAAGGGCTTAAACGAAGATAAGTAATGTTAAAGGTTCCTAAAAACGAGGTTAT
CTAAGGAGGGACACACCAAC

Downstream 100 bases:

>100_bases
TATTTAAAGTGGAGGCGGCTCGTCCAGAATGTGAGGGGGATGGAGCTTCTGACGTAGAGGCGCTTTTTGCCTCATAGGAA
GAAGTGAAGCCACCGAACAT

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITY
YVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREH
FGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAG
KGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVS
LEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG

Sequences:

>Translated_465_residues
MAKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITY
YVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREH
FGKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAG
KGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVS
LEHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG
>Mature_464_residues
AKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYEMPMPQWGGDLNDLDFDEITYY
VKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHF
GKVIPPTDNKFSALNSAVWSGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNSL
HSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYPAVILKGEGARGLTLSIAIAGK
GQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIVHFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSL
EHEAKVSKVSEEQLFYLMSRGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=478, Percent_Identity=40.3765690376569, Blast_Score=377, Evalue=1e-105,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=27.9220779220779, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52524; Mature: 52393

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYE
CCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVW
CHHHHHHHHHHHHHHHHHHCEEEECCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECCH
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
AVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEE
HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS
EECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC
>Mature Secondary Structure 
AKQLPDIGDYKYGFKDKDVSIFRAGRGLTKEIVEEISRMKEEPQWMLDFRLKSLDKFYE
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MPMPQWGGDLNDLDFDEITYYVKPSEKSEKSWDEVPDEIKATFDKLGIPEAEQKYLAGVS
CCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHCCC
AQYESEVVYHNMKEDLEALGIVFKDTDSALKENEDIFREHFGKVIPPTDNKFSALNSAVW
CHHHHHHHHHHHHHHHHHHCEEEECCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHH
SGGSFIYVPKGVKVDTPLQAYFRINSENMGQFERTLIIVDEGAHVHYVEGCTAPVYTTNS
CCCCEEEECCCCEECCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCEEECCH
LHSAVVEIIIKKDAYCRYTTIQNWANNVYNLVTKRAVCEENATMEWIDGNIGSKLTMKYP
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
AVILKGEGARGLTLSIAIAGKGQHQDAGAKMIHLAPNTSSTIVSKSIAKHGGKVTYRGIV
EEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEEE
HFGPKAKNSRSNIECDTLIMDNQSTSDTIPYNEIKNDYVSLEHEAKVSKVSEEQLFYLMS
EECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
RGISEQEATEMIVMGFIEPFTRELPMEYAVEMNRLIKFEMEGSIG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]