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The map label for this gene is yrxA [H]

Identifier: 118479588

GI number: 118479588

Start: 4228752

End: 4229300

Strand: Direct

Name: yrxA [H]

Synonym: BALH_4013

Alternate gene names: 118479588

Gene position: 4228752-4229300 (Clockwise)

Preceding gene: 118479587

Following gene: 118479589

Centisome position: 80.44

GC content: 35.88

Gene sequence:

>549_bases
ATGATAATGAAACAAAATGAACAAAAAAAGATCTTAGGTGAAGAAAGACGACAACTTATCCTTCAGTGGCTTCTAGCTGC
AAATGAACCGTTATCTGGGAATGAACTCTCGAAAAAAACGAACGTAAGTAGACAAGTTATCGTGCAAGATATTTCCTTGC
TTAAAGCAAGAAACGAACCAATTATCGCAACTGCCCAAGGATATTTATATTTAAAACCACAAGAGAAACAACAAGCTTTC
GAACGCGTAATTGTATGCCAACATAAACCAGCAGAAGTACGTCAAGAACTTACAATGCTTGTTGACCACGGCGTTACGAT
TAAAGATGTAAAAGTTGAGCATCCTGTATACGGTGACTTAACAGCATCCATCATGGTAAGTAATCGCTTTGATGTAGAGC
AATATTTACAAAAAATAGAAAACACAAATGCTTCCTATCTATCGCAATTAACAGATGGTATTCACTTACATACAATTGAA
GCAGATTCTAAAGAGAAGTTAGATGCTGCTTGCGAAGCTTTAGATAAAGCAGGATTTCTCGTTTATTAA

Upstream 100 bases:

>100_bases
ATGTCCGCTTCTCTTTCGGACAACAAACAACGAAAGATCAAATTGATACTACTATTCATGCACTACACACAATTGGAAAT
CAATTTTATAGAGGTGTTAA

Downstream 100 bases:

>100_bases
TGTAAAGCACAGAGTTTTTTTATCATTCTCTGTGCTTTTTTAATGATATAATATTGTAATCAATTGTAAAGGAGATCAAA
GATGGGAATTGCACTCGTTC

Product: transcriptional regulator

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIMKQNEQKKILGEERRQLILQWLLAANEPLSGNELSKKTNVSRQVIVQDISLLKARNEPIIATAQGYLYLKPQEKQQAF
ERVIVCQHKPAEVRQELTMLVDHGVTIKDVKVEHPVYGDLTASIMVSNRFDVEQYLQKIENTNASYLSQLTDGIHLHTIE
ADSKEKLDAACEALDKAGFLVY

Sequences:

>Translated_182_residues
MIMKQNEQKKILGEERRQLILQWLLAANEPLSGNELSKKTNVSRQVIVQDISLLKARNEPIIATAQGYLYLKPQEKQQAF
ERVIVCQHKPAEVRQELTMLVDHGVTIKDVKVEHPVYGDLTASIMVSNRFDVEQYLQKIENTNASYLSQLTDGIHLHTIE
ADSKEKLDAACEALDKAGFLVY
>Mature_182_residues
MIMKQNEQKKILGEERRQLILQWLLAANEPLSGNELSKKTNVSRQVIVQDISLLKARNEPIIATAQGYLYLKPQEKQQAF
ERVIVCQHKPAEVRQELTMLVDHGVTIKDVKVEHPVYGDLTASIMVSNRFDVEQYLQKIENTNASYLSQLTDGIHLHTIE
ADSKEKLDAACEALDKAGFLVY

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 20702; Mature: 20702

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKQNEQKKILGEERRQLILQWLLAANEPLSGNELSKKTNVSRQVIVQDISLLKARNEP
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCC
IIATAQGYLYLKPQEKQQAFERVIVCQHKPAEVRQELTMLVDHGVTIKDVKVEHPVYGDL
EEEEECCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
TASIMVSNRFDVEQYLQKIENTNASYLSQLTDGIHLHTIEADSKEKLDAACEALDKAGFL
EEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC
VY
CC
>Mature Secondary Structure
MIMKQNEQKKILGEERRQLILQWLLAANEPLSGNELSKKTNVSRQVIVQDISLLKARNEP
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHCCCC
IIATAQGYLYLKPQEKQQAFERVIVCQHKPAEVRQELTMLVDHGVTIKDVKVEHPVYGDL
EEEEECCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
TASIMVSNRFDVEQYLQKIENTNASYLSQLTDGIHLHTIEADSKEKLDAACEALDKAGFL
EEEEEECCCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC
VY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]