| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is sugE [H]
Identifier: 118479400
GI number: 118479400
Start: 4029427
End: 4029759
Strand: Direct
Name: sugE [H]
Synonym: BALH_3817
Alternate gene names: 118479400
Gene position: 4029427-4029759 (Clockwise)
Preceding gene: 118479399
Following gene: 118479411
Centisome position: 76.65
GC content: 35.74
Gene sequence:
>333_bases ATGGCATGGATTTATGTAATCATAGCTGGTATTATTGAAATCTTTTGGGTCATTGGACTTAAAAAAGCGGAGGCACCACT TGAATGGGCTGGTGTTGCGTTATTAATTACAATTAGTTTCGTCTTATTATTTAGAGCTTATAAAGATTTACCTGTTGGTA CTGTATACGCAGTCTTCACTGGAATTGGAGCTGGTGGAATCGTTCTTACAGAAATTTTCATTTTCGGAGAGCCATTCTCT ATCGTAAAAGTATTATTAATTGGTTTAATCTTCTTCGGCGTAATTGGTTTAAAACGAGTAACAGAAGAAAAAGAAACGAA GGAGGTCGCATAA
Upstream 100 bases:
>100_bases AAGTATTTTGGCGAGGCCTTTCAAACTGACGGATTGCTCCTTTGCAATGCGTCGTTTTTAAGCCCTTTACCTAACGACTG GTAGGAAGGAGAAATGACAT
Downstream 100 bases:
>100_bases AATGGCTTGGGTATTTTTAATTCTAGCTGGTATTTGTGAAATTATTGGTGTACTCTTTATGAAAGTAGCCACTGAAAAGA AAGGCTGGGCACCAAAAGTT
Product: quaternary ammonium compound-resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAWIYVIIAGIIEIFWVIGLKKAEAPLEWAGVALLITISFVLLFRAYKDLPVGTVYAVFTGIGAGGIVLTEIFIFGEPFS IVKVLLIGLIFFGVIGLKRVTEEKETKEVA
Sequences:
>Translated_110_residues MAWIYVIIAGIIEIFWVIGLKKAEAPLEWAGVALLITISFVLLFRAYKDLPVGTVYAVFTGIGAGGIVLTEIFIFGEPFS IVKVLLIGLIFFGVIGLKRVTEEKETKEVA >Mature_109_residues AWIYVIIAGIIEIFWVIGLKKAEAPLEWAGVALLITISFVLLFRAYKDLPVGTVYAVFTGIGAGGIVLTEIFIFGEPFSI VKVLLIGLIFFGVIGLKRVTEEKETKEVA
Specific function: Part of a multidrug efflux pump. Confers resistance to a broad range of toxic compounds such as cationic dyes, neutral and anionic antimicrobials [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. YkkC/ykkD (TC 2.A.7.1.5) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=105, Percent_Identity=40.9523809523809, Blast_Score=74, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 12047; Mature: 11916
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWIYVIIAGIIEIFWVIGLKKAEAPLEWAGVALLITISFVLLFRAYKDLPVGTVYAVFT CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GIGAGGIVLTEIFIFGEPFSIVKVLLIGLIFFGVIGLKRVTEEKETKEVA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AWIYVIIAGIIEIFWVIGLKKAEAPLEWAGVALLITISFVLLFRAYKDLPVGTVYAVFT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH GIGAGGIVLTEIFIFGEPFSIVKVLLIGLIFFGVIGLKRVTEEKETKEVA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA