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The map label for this gene is ytrA [H]

Identifier: 118479280

GI number: 118479280

Start: 3913790

End: 3914296

Strand: Direct

Name: ytrA [H]

Synonym: BALH_3694

Alternate gene names: 118479280

Gene position: 3913790-3914296 (Clockwise)

Preceding gene: 118479266

Following gene: 118479281

Centisome position: 74.45

GC content: 35.7

Gene sequence:

>507_bases
TTGACAAACACATTCATCACCTATATCGTATTAAGTGTACTACACACATTAGTACACTTAATACATGTCAGGAAGGAGAC
ATTGCTCTTGCATATTCAACTTGATCCAAGAAGCAACACTCCGATATGGGAACAAATTGTTCAAAATATAAAAGAACTCG
TATTGAAAAACATGTTAGCTCCAAGTGATAAACTTCCTTCTGTACGCGAACTCGCTTCTTTACTCGTTATTAATCCAAAT
ACAGTGAGTAAAGCGTACCAAGAGTTAGAGCGACAAGGGATTATTGAAACATTACGAGGAAAAGGAACATTTGTATCCCA
ATCGATTACCCCAACATTAGACGAAAGGAAAATCGCTATGGTTGAAAAGCAATTTCATCAATTACTATTAGAAGCCTCTT
ATCTTGGTGTTACGAAAGATAAAATTCATGATTGGATAGATTCATACTACAAAGAGATTGGAGGAAATGCAGATGCTGAA
AGTGACAAGCTTGAAGAAAACGATTGA

Upstream 100 bases:

>100_bases
TATTCCAAAAACTCGCTTCATGACCAACCCTCCATTCTATATCAAACCTATTTTTTCCAATTTATTATTTTTTAATACCA
TATTTTTCTAACATTTTCAG

Downstream 100 bases:

>100_bases
TAGTCAAACGATTTTAGACGATGTTTCTTTCACATTACAGAGAGGAAGTATCATCGGATTACTCGGAAGAAACGGTGCAG
GGAAAACAACTTTATTACGA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTNTFITYIVLSVLHTLVHLIHVRKETLLLHIQLDPRSNTPIWEQIVQNIKELVLKNMLAPSDKLPSVRELASLLVINPN
TVSKAYQELERQGIIETLRGKGTFVSQSITPTLDERKIAMVEKQFHQLLLEASYLGVTKDKIHDWIDSYYKEIGGNADAE
SDKLEEND

Sequences:

>Translated_168_residues
MTNTFITYIVLSVLHTLVHLIHVRKETLLLHIQLDPRSNTPIWEQIVQNIKELVLKNMLAPSDKLPSVRELASLLVINPN
TVSKAYQELERQGIIETLRGKGTFVSQSITPTLDERKIAMVEKQFHQLLLEASYLGVTKDKIHDWIDSYYKEIGGNADAE
SDKLEEND
>Mature_167_residues
TNTFITYIVLSVLHTLVHLIHVRKETLLLHIQLDPRSNTPIWEQIVQNIKELVLKNMLAPSDKLPSVRELASLLVINPNT
VSKAYQELERQGIIETLRGKGTFVSQSITPTLDERKIAMVEKQFHQLLLEASYLGVTKDKIHDWIDSYYKEIGGNADAES
DKLEEND

Specific function: Negatively regulates ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 19204; Mature: 19073

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTFITYIVLSVLHTLVHLIHVRKETLLLHIQLDPRSNTPIWEQIVQNIKELVLKNMLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PSDKLPSVRELASLLVINPNTVSKAYQELERQGIIETLRGKGTFVSQSITPTLDERKIAM
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH
VEKQFHQLLLEASYLGVTKDKIHDWIDSYYKEIGGNADAESDKLEEND
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNTFITYIVLSVLHTLVHLIHVRKETLLLHIQLDPRSNTPIWEQIVQNIKELVLKNMLA
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PSDKLPSVRELASLLVINPNTVSKAYQELERQGIIETLRGKGTFVSQSITPTLDERKIAM
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH
VEKQFHQLLLEASYLGVTKDKIHDWIDSYYKEIGGNADAESDKLEEND
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]