Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 118479083

GI number: 118479083

Start: 3705753

End: 3706676

Strand: Reverse

Name: rsgA [H]

Synonym: BALH_3492

Alternate gene names: 118479083

Gene position: 3706676-3705753 (Counterclockwise)

Preceding gene: 118479084

Following gene: 118479082

Centisome position: 70.51

GC content: 36.47

Gene sequence:

>924_bases
ATGAATTACAGCTTCACTTTATACAGAATAAAGGAGAATTATATGCCAGAAGGAAAAATTGTAAAAGCTCTAAGTGGATT
TTATTATGTGCAGCATGAAGAAGGGATTACACAATGTCGCGGACGTGGTGTGTTTAGAAAAAATAAAATTACACCACTGG
TAGGAGACCAAGTTGTCTTTCAGGCTGATAATCCAAGTGAAGGATACGTGCTTGAAGTATTTGATCGAAAAAATGAACTT
GTTAGGCCTCCTATTGCTAATGTTGATCAGGCAATTCTCGTTTTTTCTGCAGTAGAACCAGATTTTAATCCGGGACTGTT
AGATCGATTTTTGGTGCTAATTGAATATCATAACATTAAGCCGATTATTTGCATTAGTAAGATGGATTTAGTGGATGAAA
AAATGAGAGAGACTGTTGAAGCTTATGCAAATGACTATCGTGAGATGGGATATGATGTATTATTTACTTCTATAAATACA
TCGGAAAGTATTGATATTTTAAAACCATTCTTAGAAGGGTGTGTTTCCGTCGTTGCGGGACAATCTGGTGTTGGGAAATC
TTCTATGCTTAACGTCTTACGTCCAGAATTAGAACTGAAAACGAATGATATTTCCTCACATTTAGGACGCGGAAAACATA
CGACAAGACACGTAGAATTAATTGCGATTGGAAGCGGACTAGTTGCAGATACACCTGGTTTTAGTTCACTCGATTTCATA
GATATAGAGGTAGAAGATCTTACATATTGCTTTCCAGAGTTGAAAGAAGCGAGTCAATACTGTAAATTTAGAGGGTGTAC
ACATCTTTCTGAACCGAAATGTGCTGTGAAGGCTGCGGTTGAAGAGGGGAAAATTACAGAATATCGTTATAAGAATTATA
AACAATTCGTAGAAGAAATTAGAGAGAGAAAGCCGAGGTATTAG

Upstream 100 bases:

>100_bases
TTATAAATAATATTTTAAATTTGATGGTAGATTAAATATATTAACTTATATATATGACGGGTTTTGAAATCTTTATTTAA
AGAATAATAATCCATTCAAT

Downstream 100 bases:

>100_bases
TTATGATTAAAATTGCACCATCGATCTTATCAGCAGATTTTTCAAAATTAGGGGAAGAGATTAAAGATGTAGAAAAGGGC
GGAGCGGATTACATTCATGT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MNYSFTLYRIKENYMPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVFDRKNEL
VRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINT
SESIDILKPFLEGCVSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFI
DIEVEDLTYCFPELKEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY

Sequences:

>Translated_307_residues
MNYSFTLYRIKENYMPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVFDRKNEL
VRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINT
SESIDILKPFLEGCVSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFI
DIEVEDLTYCFPELKEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY
>Mature_307_residues
MNYSFTLYRIKENYMPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVFQADNPSEGYVLEVFDRKNEL
VRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIKPIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINT
SESIDILKPFLEGCVSVVAGQSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFI
DIEVEDLTYCFPELKEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEIRERKPRY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=307, Percent_Identity=36.4820846905537, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34956; Mature: 34956

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYSFTLYRIKENYMPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVF
CCCEEEEEEEECCCCCCCHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCEECCEEEE
QADNPSEGYVLEVFDRKNELVRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIK
ECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC
PIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGCVSVVAG
EEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
QSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFI
CCCCCHHHHHHHHCCCCEEECCHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCEEE
DIEVEDLTYCFPELKEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEI
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
RERKPRY
HHHCCCC
>Mature Secondary Structure
MNYSFTLYRIKENYMPEGKIVKALSGFYYVQHEEGITQCRGRGVFRKNKITPLVGDQVVF
CCCEEEEEEEECCCCCCCHHHHHHHCEEEEECCCCHHHHHCCCCCCCCCCCCEECCEEEE
QADNPSEGYVLEVFDRKNELVRPPIANVDQAILVFSAVEPDFNPGLLDRFLVLIEYHNIK
ECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCC
PIICISKMDLVDEKMRETVEAYANDYREMGYDVLFTSINTSESIDILKPFLEGCVSVVAG
EEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC
QSGVGKSSMLNVLRPELELKTNDISSHLGRGKHTTRHVELIAIGSGLVADTPGFSSLDFI
CCCCCHHHHHHHHCCCCEEECCHHHHHHCCCCCCCEEEEEEEECCCCEECCCCCCCCEEE
DIEVEDLTYCFPELKEASQYCKFRGCTHLSEPKCAVKAAVEEGKITEYRYKNYKQFVEEI
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
RERKPRY
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]