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The map label for this gene is tsf [H]

Identifier: 118479048

GI number: 118479048

Start: 3670577

End: 3671473

Strand: Reverse

Name: tsf [H]

Synonym: BALH_3457

Alternate gene names: 118479048

Gene position: 3671473-3670577 (Counterclockwise)

Preceding gene: 118479049

Following gene: 118479047

Centisome position: 69.84

GC content: 40.25

Gene sequence:

>897_bases
ATGAAAAGTATGGCAATCACTGCACAAATGGTAAAAGAATTACGTGAAAAAACTGGCGCAGGTATGATGGACTGCAAAAA
AGCTTTAACAGAAACTAACGGCGACATGGAGAAGGCAATTGACTTCTTACGTGAAAAAGGTATCGCGAAAGCTGCTAAAA
AAGCAGACCGCATCGCTGCTGAAGGTTTAACTTTCATCGAAACAAACGGTAACGACGGTTTAATCTTAGAATTAAACTCT
GAAACTGATTTCGTTGCGAAAAACGAAGGTTTCCAAACATTAATTAAAGAATTAGCTGCTCACTTATTAGCTAACAAACC
AGCTAACGTTGAAGAAGCTATGGCTCAAACAATGGAAAACGGCAAAAAAGTAGAAGAGCACATCAACGAAGCAATCGCTA
AAATTGGTGAAAAACTTACACTTCGTCGTTTCGAAATCGTATCAAAAACTGATGCAGATGCATTCGGCGCTTACCTACAC
ATGGGTGGACGCATTGGTGTACTAACAGTTCTTGAAGGTTCTACTGATGAAGCGGCTGCTAAAGATGTTGCAATGCACAT
CGCTGCAGTTAACCCTAAATACATCGACCGCGATGCTGTAACAGCTGAAGAAGTTGAGCATGAGCGTCAAGTATTAACAC
AACAAGCATTAAACGAAGGCAAGCCTGAAAAAATCGTTGCAAAAATGGTTGAAGGCCGTCTTGGCAAATTCTTCGAAGAA
ATTTGCTTACTTGACCAAGCATTCGTTAAAAACCCTGATATGAAAGTTCGTCAGTTCGTTGAGTCTAAAGGCGGAACATT
AAAAGGATTCGTTCGCTACGCTGTTGGTGAAGGTATCGAAAAACGCGAAGACAACTTTGCTGAAGAAGTAATGAACCAAG
TAAAAGGTAGTAACTAA

Upstream 100 bases:

>100_bases
GCGTAACAAAGTTGGAAAGGTGATAAGGGGTTCGGCCTTTTATCACCTTTTTTAAGGTATAAACACCTTTATAAAAGGTA
TAAATACATATTTTAGGAGG

Downstream 100 bases:

>100_bases
TACAGATTAGGGAACACATTGTGTTCCCTTTTTTAAAATAAAGATGTAAGCAATTGGAGGTTCATTATGAGTAAACCGAA
ATATAATCGTGTCGTTTTAA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKSMAITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAAEGLTFIETNGNDGLILELNS
ETDFVAKNEGFQTLIKELAAHLLANKPANVEEAMAQTMENGKKVEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLH
MGGRIGVLTVLEGSTDEAAAKDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVEGRLGKFFEE
ICLLDQAFVKNPDMKVRQFVESKGGTLKGFVRYAVGEGIEKREDNFAEEVMNQVKGSN

Sequences:

>Translated_298_residues
MKSMAITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAAEGLTFIETNGNDGLILELNS
ETDFVAKNEGFQTLIKELAAHLLANKPANVEEAMAQTMENGKKVEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLH
MGGRIGVLTVLEGSTDEAAAKDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVEGRLGKFFEE
ICLLDQAFVKNPDMKVRQFVESKGGTLKGFVRYAVGEGIEKREDNFAEEVMNQVKGSN
>Mature_298_residues
MKSMAITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAAEGLTFIETNGNDGLILELNS
ETDFVAKNEGFQTLIKELAAHLLANKPANVEEAMAQTMENGKKVEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLH
MGGRIGVLTVLEGSTDEAAAKDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVEGRLGKFFEE
ICLLDQAFVKNPDMKVRQFVESKGGTLKGFVRYAVGEGIEKREDNFAEEVMNQVKGSN

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=307, Percent_Identity=24.1042345276873, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI291084500, Length=328, Percent_Identity=23.780487804878, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI291084498, Length=128, Percent_Identity=32.8125, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI291084502, Length=103, Percent_Identity=36.8932038834951, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1786366, Length=292, Percent_Identity=47.6027397260274, Blast_Score=238, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17561440, Length=300, Percent_Identity=26.6666666666667, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI19921466, Length=146, Percent_Identity=34.9315068493151, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 32782; Mature: 32782

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMAITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGLTFIETNGNDGLILELNSETDFVAKNEGFQTLIKELAAHLLANKPANVEEAMAQTMEN
CCCEEEEECCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GKKVEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHH
KDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVEGRLGKFFEE
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ICLLDQAFVKNPDMKVRQFVESKGGTLKGFVRYAVGEGIEKREDNFAEEVMNQVKGSN
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSMAITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAA
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGLTFIETNGNDGLILELNSETDFVAKNEGFQTLIKELAAHLLANKPANVEEAMAQTMEN
CCCEEEEECCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GKKVEEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHH
KDVAMHIAAVNPKYIDRDAVTAEEVEHERQVLTQQALNEGKPEKIVAKMVEGRLGKFFEE
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ICLLDQAFVKNPDMKVRQFVESKGGTLKGFVRYAVGEGIEKREDNFAEEVMNQVKGSN
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA