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The map label for this gene is rimP [H]

Identifier: 118479037

GI number: 118479037

Start: 3655413

End: 3655937

Strand: Reverse

Name: rimP [H]

Synonym: BALH_3445

Alternate gene names: 118479037

Gene position: 3655937-3655413 (Counterclockwise)

Preceding gene: 118479038

Following gene: 118479036

Centisome position: 69.54

GC content: 39.81

Gene sequence:

>525_bases
ATGGACGGGGTCTTTTCTTGTGAATGGTACATGGCGGCAGGAAGGAGGCTGTTTATGGATAAGAAAGTCACAGAAGTTGT
AGAAGCATTTGCGCAGCCAATCGTTGAAGAGTTAAATCTTGAACTTGTAGATGTAGAGTATGTGAAAGAAGGACAAGACT
GGTTCTTACGCGTATTCATCGATTCTGAAAAGGGAGTCGACATTGAAGAATGCGGTGCGGTGAGTGAACGTTTAAGCGAA
GCTTTAGATAAAGAGGATCCAATTCCTCATCTTTACTTTTTGGATGTGTCATCTCCTGGAGCAGAACGTCCATTAAAGAA
AGAGAAAGACTTCCAGCAAGCGGTAGGAAAACAAGTGGCAATTAAAACATATGAGCCGATTGATGGTGAAAAGATGTTTG
AAGGAAAAATGCTTTCCTACGATGGTACTACAATTACACTATTATTAACAATTAAAACACGTAAAAAAGAAATCCAAATT
CCAATGGACAAAGTTGCAAATGCGCGACTTGCTGTTACGTTTTAG

Upstream 100 bases:

>100_bases
AAGTTTTACTTCTTAAATTTGGTAATACTAAGACAGATATTCCCTGCTTAACGGCAGGGGCTTTTGTTAGCTAACGAGAA
AGAATAAGATAGACCGTTCT

Downstream 100 bases:

>100_bases
TTAGAAGGGGGATCTTCATGAGCACTGAGTTGTTAGATGCCTTGCTCGTATTAGAGTCAGAAAAAGGAATTAGCAAAGAT
ATTATTATTGATGCGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MDGVFSCEWYMAAGRRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSE
ALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQI
PMDKVANARLAVTF

Sequences:

>Translated_174_residues
MDGVFSCEWYMAAGRRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSE
ALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQI
PMDKVANARLAVTF
>Mature_174_residues
MDGVFSCEWYMAAGRRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSE
ALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQI
PMDKVANARLAVTF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=129, Percent_Identity=37.2093023255814, Blast_Score=90, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19818; Mature: 19818

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVFSCEWYMAAGRRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFI
CCCEEEEHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEE
DSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVA
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCEEE
IKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
EEECCCCCCCEECCCEEEEECCCEEEEEEEEECCCCEEECCHHHHCCCEEEEEC
>Mature Secondary Structure
MDGVFSCEWYMAAGRRLFMDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFI
CCCEEEEHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEE
DSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVA
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCEEE
IKTYEPIDGEKMFEGKMLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
EEECCCCCCCEECCCEEEEECCCEEEEEEEEECCCCEEECCHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA