Click here to switch to the map view.

The map label for this gene is ydhB [H]

Identifier: 118478909

GI number: 118478909

Start: 3511360

End: 3512178

Strand: Reverse

Name: ydhB [H]

Synonym: BALH_3312

Alternate gene names: 118478909

Gene position: 3512178-3511360 (Counterclockwise)

Preceding gene: 118478910

Following gene: 118478907

Centisome position: 66.81

GC content: 36.14

Gene sequence:

>819_bases
GTGCTTTTTATTTGTATGCAAGGAAGAAGATGGTGGATAATTGGATTACTGGAGGGAGAGTATGTGGCAATTATTATAAC
GATGTTAGTAATGGGGGTTTTATTAGGATTTGTTGGAGCTGGGGGAGCTGGGTTTATTATCGCGATACTCACGTTAGTAT
TCCATATTCCTATTCACGTTGCATTTGCAACGTCTTTAACTGCTATGGCATTTACGACATTATCTGGGGTTATAAGTCAT
TATCGTGAAGGAAATGTAGTACTTACTATAGGCGGGATTGTTGGTGGATGTGGGGCATTTGGTTCTTATATCGGTTCCAA
AATTGGCTCGTTTATACCACCGTATCTTCTTCATTGGTTTACAGCTGGGATGTTATTTTTATCTGCGATTTTTATGTGTA
TTAAATTAATTAAATTTCAAAATGAGGAAGAAGTATGTTTAGTAAAAATCAAAGATATTTCGAAAGAAAACATAATGAAA
TGTATATGTCTTGGGTTAGTCACTGGAATGATGGCTGGTTCATTCGGGATTGGTTCTGCACCATTTATTCAACTTGGATT
AATGGTTCTATTAGGATTGACGATTCAGCAATCTGTAGGAACAACAATGCTTGTTATATTGCCGATTGCGATTGGGGGTG
GGTTAGGATATAGTTCAGAAGGGTATCTAGATTATATATTATTATTGCAAGTATTAATTGGGACGATGTTAGGAGCTTAT
ATCGGTGCGAAGTTTACAAATTATGCACCACGTATGCTTTTGAAGTTTTCAATGATTATGACACCAGTTTTCGCTGGATG
TATGTTATTAATGGAATGA

Upstream 100 bases:

>100_bases
AGTAGCTGGAGTAGTAGTTGCTGGCCCCGCGGTTATTTTGATTAATCAAGATTAAGTACATAGTATCAATTTAGAAAAGT
ACGAAAAGCATCCTTCCAGG

Downstream 100 bases:

>100_bases
AAATAATATAGCAAACTAATATGTTTTACGAATGAATTATGTAAGTAATTCATATTTCCCATATAAAAGGATTTGTTTTA
ATATAATGAGTGTAAAGTTC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MLFICMQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVAFATSLTAMAFTTLSGVISH
YREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMK
CICLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAY
IGAKFTNYAPRMLLKFSMIMTPVFAGCMLLME

Sequences:

>Translated_272_residues
MLFICMQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVAFATSLTAMAFTTLSGVISH
YREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMK
CICLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAY
IGAKFTNYAPRMLLKFSMIMTPVFAGCMLLME
>Mature_272_residues
MLFICMQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHVAFATSLTAMAFTTLSGVISH
YREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPYLLHWFTAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMK
CICLGLVTGMMAGSFGIGSAPFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAY
IGAKFTNYAPRMLLKFSMIMTPVFAGCMLLME

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 29200; Mature: 29200

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFICMQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHV
CEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AFATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPYLLHWF
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMKCICLGLVTGMMAGSFGIGSA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IGAKFTNYAPRMLLKFSMIMTPVFAGCMLLME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLFICMQGRRWWIIGLLEGEYVAIIITMLVMGVLLGFVGAGGAGFIIAILTLVFHIPIHV
CEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AFATSLTAMAFTTLSGVISHYREGNVVLTIGGIVGGCGAFGSYIGSKIGSFIPPYLLHWF
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TAGMLFLSAIFMCIKLIKFQNEEEVCLVKIKDISKENIMKCICLGLVTGMMAGSFGIGSA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PFIQLGLMVLLGLTIQQSVGTTMLVILPIAIGGGLGYSSEGYLDYILLLQVLIGTMLGAY
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IGAKFTNYAPRMLLKFSMIMTPVFAGCMLLME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]