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The map label for this gene is rapC [H]

Identifier: 118478768

GI number: 118478768

Start: 3340908

End: 3342056

Strand: Direct

Name: rapC [H]

Synonym: BALH_3160

Alternate gene names: 118478768

Gene position: 3340908-3342056 (Clockwise)

Preceding gene: 118478767

Following gene: 118478782

Centisome position: 63.55

GC content: 28.29

Gene sequence:

>1149_bases
TTGTTATTTTTGATACTATATTTTATAAGAATATTCAAAAAGCGAGGGGATTTCATGAACGTTCAACTACAAGGTAATGA
ACAAATTACAAAATTATTTAATGACTGGTATAGGATAATATTGCAACATCAAACAATCGAAGCAACAAAAATTAAAAATG
ATATTGAAGATAAAATCTCTAATTCTGACAAAGATACTAATCTACTATTGTATTATTCACTTTTAAATTTTAGATATGAA
GTTTTAACTAATGGTTTAAATATTACAAAAGATGCTTTTAATAAAATTGATTCCTATCCAATACCAGAAAATAATTGTCT
TACTTATTATTATCACTTCTTTAAAGCCATTCATAATACAATTCTTGCAGACTATAATGAAGCTAAAAATCATTTCGAGA
AAGCAGAAAAACTTTTAAAATATGTGCCTGAAGAATTAGAACTTGCTGAATTCAATTATCGTATCGCCTCTTTTTATTAC
CAAATATACAAGCCATTATTAGCTATTAACTACATACAACAAGCTAAAATTTTTTTCTCTACACACACCGGATATGAAGT
TAACTTAGCTGCATGTGACAATGTTTTCGGGCTATCTTGTCTAGATTTAAGACAATTTGAACAAGCTGAAGAAAGTTTCA
ACTCCGCTATCGATATTCTTAAAAAGAAGGGCGAAGAATCATTACTTTTACGTACAAGAAATAATATTGGTTTACTGTAC
GCAAACCAAAACCTTTCTTCTTTAGCAATTCGTCATCTATCAGAAGTTACTGAAAGTATGCCGAATCATTTTAAAGCTCT
TTATCTACAAGCAGATGAATATTTGAAATTAGGTGAAAAAGAATCTGCATCTCAATTTATTGAAAGAGGTTTATCCGTCT
GTAACAAACTAGAAATTAAAGAATATCAATATCGATTTAAAATCTTAGACGAGCTTTGTAAAGAATCAAATACAATTGAA
ATAGAAAAAGTAGTTTTAGCAGGAGTTTCTTATTTCGAAACAGAAGAGTTATGGGAATGCATCGAAGAGTATACAGAAAG
AATAGCAAATAAGTTTTATGCAGAAGAAAATCACTTCAAAGCAAGTAAATATTTTTATTTAAGCAATCAAGCACGTAAAA
AATCATTAGCTAAAGGGGCGTTAAAATAA

Upstream 100 bases:

>100_bases
TCCCTTTCTTTACTCCAAAACAAAATTAACACTATTCCAATCGGCTTACTGAAAAGTTTGTTAAACAAATATTGAGAAAT
AAAAATCATATTTCTAAATA

Downstream 100 bases:

>100_bases
TGAAAAAAATTGGTTTAACACTATCGGCAATAGCATTGACATTAATTTTGAGTTTTGGATTTAGTCATAATTCCAAAGAT
GTGGCCTTAAATAAAGGCGA

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLFLILYFIRIFKKRGDFMNVQLQGNEQITKLFNDWYRIILQHQTIEATKIKNDIEDKISNSDKDTNLLLYYSLLNFRYE
VLTNGLNITKDAFNKIDSYPIPENNCLTYYYHFFKAIHNTILADYNEAKNHFEKAEKLLKYVPEELELAEFNYRIASFYY
QIYKPLLAINYIQQAKIFFSTHTGYEVNLAACDNVFGLSCLDLRQFEQAEESFNSAIDILKKKGEESLLLRTRNNIGLLY
ANQNLSSLAIRHLSEVTESMPNHFKALYLQADEYLKLGEKESASQFIERGLSVCNKLEIKEYQYRFKILDELCKESNTIE
IEKVVLAGVSYFETEELWECIEEYTERIANKFYAEENHFKASKYFYLSNQARKKSLAKGALK

Sequences:

>Translated_382_residues
MLFLILYFIRIFKKRGDFMNVQLQGNEQITKLFNDWYRIILQHQTIEATKIKNDIEDKISNSDKDTNLLLYYSLLNFRYE
VLTNGLNITKDAFNKIDSYPIPENNCLTYYYHFFKAIHNTILADYNEAKNHFEKAEKLLKYVPEELELAEFNYRIASFYY
QIYKPLLAINYIQQAKIFFSTHTGYEVNLAACDNVFGLSCLDLRQFEQAEESFNSAIDILKKKGEESLLLRTRNNIGLLY
ANQNLSSLAIRHLSEVTESMPNHFKALYLQADEYLKLGEKESASQFIERGLSVCNKLEIKEYQYRFKILDELCKESNTIE
IEKVVLAGVSYFETEELWECIEEYTERIANKFYAEENHFKASKYFYLSNQARKKSLAKGALK
>Mature_382_residues
MLFLILYFIRIFKKRGDFMNVQLQGNEQITKLFNDWYRIILQHQTIEATKIKNDIEDKISNSDKDTNLLLYYSLLNFRYE
VLTNGLNITKDAFNKIDSYPIPENNCLTYYYHFFKAIHNTILADYNEAKNHFEKAEKLLKYVPEELELAEFNYRIASFYY
QIYKPLLAINYIQQAKIFFSTHTGYEVNLAACDNVFGLSCLDLRQFEQAEESFNSAIDILKKKGEESLLLRTRNNIGLLY
ANQNLSSLAIRHLSEVTESMPNHFKALYLQADEYLKLGEKESASQFIERGLSVCNKLEIKEYQYRFKILDELCKESNTIE
IEKVVLAGVSYFETEELWECIEEYTERIANKFYAEENHFKASKYFYLSNQARKKSLAKGALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 45030; Mature: 45030

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLILYFIRIFKKRGDFMNVQLQGNEQITKLFNDWYRIILQHQTIEATKIKNDIEDKIS
CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
NSDKDTNLLLYYSLLNFRYEVLTNGLNITKDAFNKIDSYPIPENNCLTYYYHFFKAIHNT
CCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ILADYNEAKNHFEKAEKLLKYVPEELELAEFNYRIASFYYQIYKPLLAINYIQQAKIFFS
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
THTGYEVNLAACDNVFGLSCLDLRQFEQAEESFNSAIDILKKKGEESLLLRTRNNIGLLY
ECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE
ANQNLSSLAIRHLSEVTESMPNHFKALYLQADEYLKLGEKESASQFIERGLSVCNKLEIK
ECCCHHHHHHHHHHHHHHHCCHHHHHHEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EYQYRFKILDELCKESNTIEIEKVVLAGVSYFETEELWECIEEYTERIANKFYAEENHFK
HHHHHHHHHHHHHCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASKYFYLSNQARKKSLAKGALK
HHEEEEECCHHHHHHHHHCCCC
>Mature Secondary Structure
MLFLILYFIRIFKKRGDFMNVQLQGNEQITKLFNDWYRIILQHQTIEATKIKNDIEDKIS
CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
NSDKDTNLLLYYSLLNFRYEVLTNGLNITKDAFNKIDSYPIPENNCLTYYYHFFKAIHNT
CCCCCCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ILADYNEAKNHFEKAEKLLKYVPEELELAEFNYRIASFYYQIYKPLLAINYIQQAKIFFS
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
THTGYEVNLAACDNVFGLSCLDLRQFEQAEESFNSAIDILKKKGEESLLLRTRNNIGLLY
ECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE
ANQNLSSLAIRHLSEVTESMPNHFKALYLQADEYLKLGEKESASQFIERGLSVCNKLEIK
ECCCHHHHHHHHHHHHHHHCCHHHHHHEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EYQYRFKILDELCKESNTIEIEKVVLAGVSYFETEELWECIEEYTERIANKFYAEENHFK
HHHHHHHHHHHHHCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ASKYFYLSNQARKKSLAKGALK
HHEEEEECCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]