Click here to switch to the map view.

The map label for this gene is ydbD [H]

Identifier: 118478427

GI number: 118478427

Start: 2953032

End: 2953916

Strand: Direct

Name: ydbD [H]

Synonym: BALH_2795

Alternate gene names: 118478427

Gene position: 2953032-2953916 (Clockwise)

Preceding gene: 118478426

Following gene: 118478430

Centisome position: 56.17

GC content: 35.48

Gene sequence:

>885_bases
ATGTTAACTAACTTAAAAGAGGTGTACTTCATGTTTTATTATAAAGAGGAAATAATTAATATGATTAAGCCGGACAAACC
AGATCCAGCTGCTGCAAAAGTTTTACAAGAAATATTAGGTGGGCATTATGGTGAAATGCGTACAATGATGCAATACTTTT
TCCAAAGCTCAAATTTTAGAGGTAAAGAGAAACAATATCGTGATTTACTTCGAGGTGTTTTTTTAGAGGAAATAAGCCAT
GTAGAACTTGTACAACATACAATTAATCAACTATTAACTGGATCTGGTGAACCTACGCCTGGAAATGCTGGTATTGACAC
AGCACCACTTGACGAAGCGGTTAAACATGCAAATCCTCATCACTTTATTGTAGGGGCTCAAAGTTCATTACCTGTTGATG
CAGCTGGTAACCCATGGAATGGATCTTGGGTATATAGTCATGGAAACTTAATTAGCGATTTACTAGATAATGTCGTACTT
GAATCTACAGGTGTACTTCAAAAAACTAGAATTTATGAAATGAGTTCTAATCAAACCTTTAGAGAAACACTTGCATTTTT
AATTGTACGTGATAATGCACATCAAAATGCTTTTGCAAAAGCTTTAGAGACACTAGGCGTTGAATGGGGAAAACTCTTTC
CTGTGCCGAACTATGATATTAATAAATATCCAGAGTGTAGAAAATATGTAGACATGGGATTCCATAATGCACAATTTAAT
TTCAGCTTAGATCCAACAAGAATGGGAGAAATATTCCAAGGTGAATCTCCAAGTAGAAATAAAGGAACATTAACAGTAAC
GGAACCGCCAAAAGGTTTTCCTGTACCAGAACTTCCTGAAATGCCAAATGAGCATAGTCCCGGATTAAAAGATATGGATC
TTTAG

Upstream 100 bases:

>100_bases
GAAAATAGTTATTTTCAAAAACTTTGTATTTCGAGATAATAATTAATTGGTAAAAAAATGAATTTAAGTATTAAGAAACC
AATTAGCGGACACGATAACA

Downstream 100 bases:

>100_bases
GATCATTATGGCCAACTATTTATTCATGGTTGGCCATAGTTCTTAATAAAAATTCATGTAAGCTTGTTGTTAATATAATT
GGATGTTTTAAGAAATCCTC

Product: Mn-containing catalase

Products: NA

Alternate protein names: General stress protein 80; GSP80 [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLTNLKEVYFMFYYKEEIINMIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQYRDLLRGVFLEEISH
VELVQHTINQLLTGSGEPTPGNAGIDTAPLDEAVKHANPHHFIVGAQSSLPVDAAGNPWNGSWVYSHGNLISDLLDNVVL
ESTGVLQKTRIYEMSSNQTFRETLAFLIVRDNAHQNAFAKALETLGVEWGKLFPVPNYDINKYPECRKYVDMGFHNAQFN
FSLDPTRMGEIFQGESPSRNKGTLTVTEPPKGFPVPELPEMPNEHSPGLKDMDL

Sequences:

>Translated_294_residues
MLTNLKEVYFMFYYKEEIINMIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQYRDLLRGVFLEEISH
VELVQHTINQLLTGSGEPTPGNAGIDTAPLDEAVKHANPHHFIVGAQSSLPVDAAGNPWNGSWVYSHGNLISDLLDNVVL
ESTGVLQKTRIYEMSSNQTFRETLAFLIVRDNAHQNAFAKALETLGVEWGKLFPVPNYDINKYPECRKYVDMGFHNAQFN
FSLDPTRMGEIFQGESPSRNKGTLTVTEPPKGFPVPELPEMPNEHSPGLKDMDL
>Mature_294_residues
MLTNLKEVYFMFYYKEEIINMIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFRGKEKQYRDLLRGVFLEEISH
VELVQHTINQLLTGSGEPTPGNAGIDTAPLDEAVKHANPHHFIVGAQSSLPVDAAGNPWNGSWVYSHGNLISDLLDNVVL
ESTGVLQKTRIYEMSSNQTFRETLAFLIVRDNAHQNAFAKALETLGVEWGKLFPVPNYDINKYPECRKYVDMGFHNAQFN
FSLDPTRMGEIFQGESPSRNKGTLTVTEPPKGFPVPELPEMPNEHSPGLKDMDL

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 33196; Mature: 33196

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNLKEVYFMFYYKEEIINMIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
GKEKQYRDLLRGVFLEEISHVELVQHTINQLLTGSGEPTPGNAGIDTAPLDEAVKHANPH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCC
HFIVGAQSSLPVDAAGNPWNGSWVYSHGNLISDLLDNVVLESTGVLQKTRIYEMSSNQTF
EEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHEEECCCCCHH
RETLAFLIVRDNAHQNAFAKALETLGVEWGKLFPVPNYDINKYPECRKYVDMGFHNAQFN
HHHHHHHEEECCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
FSLDPTRMGEIFQGESPSRNKGTLTVTEPPKGFPVPELPEMPNEHSPGLKDMDL
ECCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTNLKEVYFMFYYKEEIINMIKPDKPDPAAAKVLQEILGGHYGEMRTMMQYFFQSSNFR
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
GKEKQYRDLLRGVFLEEISHVELVQHTINQLLTGSGEPTPGNAGIDTAPLDEAVKHANPH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCC
HFIVGAQSSLPVDAAGNPWNGSWVYSHGNLISDLLDNVVLESTGVLQKTRIYEMSSNQTF
EEEEECCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHEEECCCCCHH
RETLAFLIVRDNAHQNAFAKALETLGVEWGKLFPVPNYDINKYPECRKYVDMGFHNAQFN
HHHHHHHEEECCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
FSLDPTRMGEIFQGESPSRNKGTLTVTEPPKGFPVPELPEMPNEHSPGLKDMDL
ECCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]