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The map label for this gene is oppA [H]

Identifier: 118477330

GI number: 118477330

Start: 1792946

End: 1794574

Strand: Direct

Name: oppA [H]

Synonym: BALH_1647

Alternate gene names: 118477330

Gene position: 1792946-1794574 (Clockwise)

Preceding gene: 118477328

Following gene: 118477331

Centisome position: 34.11

GC content: 33.15

Gene sequence:

>1629_bases
ATGAAGTGGAAAAAGAGCCATTTAATGGTAATGGCACTTGTTATATCTTTATTATTAACAGCTTGTAATAATAAGGAAAA
TAAAAGTGATGCAGAGTCAAAAAAACAAGTATTAAATGTAACAGTATCAGAAGAGATTCCTTCTCTTGATACCGCGAAAA
CGATGGATGGTACGTCAGCGCACGTTATGCAAAACATATTTGAAGGGTTGTATGTATTAGATGATCAAGATCAGCCTATT
CCAGCGGTAGCAAAATCGTTTAAAAGAAGTGAAGATGGTAAAAAATATACATTTGATTTGCGTAAAGATGCAAAATGGTC
AAATGGTGACAATGTGACAGCTCATGATTTTATGTTTGCGTGGAAACGTGCAATTGCTCCTGAAACAGCGTCTCAATATG
CGTCCATGCTCTTTTATGTGAAAAATGCGAAAGAGATTAATAAGGGGACGATGTCTCTTGATGAACTTGGGGTTACGGTT
ATAAACGATTATAAGTTAGAGGTGGAACTAGAACAGCCAATTCCTTATTTTTTACAGTTGTTAGCACTACCTATATACCT
ACCACAGCATGAATCATTTTTGAAAGAACAAGGAAAGAACTATGCATTGGAACCTAGTAATCTCTTATATAACGGTCCAT
TTATATTAGAGAAATGGAAGCATGAACAAGAGTTTCAATTAAAGAAGAATGCTACTTATTGGGATCAAAAGAAAGTGAAA
TTAGATGAAATAAACTTTCAAATTGTAAAGGATACAATGACGGCTGTTAATTTATACGAAGCTGGTAATTTGGATAGGGT
ACCTATTAATTCTCAATTTGTAGACAAGTATAAAGGGAATAAGGAATTACATATGTCGAGTGATTCTGGAATTGCTATGC
TACGTTTTAATGAAAAAAATAATATATTAGCAAATAAAAAGGTACGTCAATCTATTTCATTAGCGTTAAATAAAGAGGAC
TTCGTTGCTCACTTTATTAATAATGGAGCAAAACCTGCCAGTGGTTTAGTACCAGCTAGTCATATAAATGAAGAGACTGG
TAAAGATTTTAGAAAAGAAAACGGAAATCTTTCTTCATATGATTTGCAAAATGCGAAAAAGATTTGGAAAGAAGCGAAAA
AAGAGCTTGGGGTAGAACAAGTAAACCTCGAGTTATTAACGTTTGAACAAGATAATGCAAAACGTATGGCAGAATATATA
AAAGGTGATTTAGAAAAGAATTTACAAGGACTAACGATACAAATTAAACAACAGCCATTTAAGCAAAAATTACAGTTAGA
ACAAACAGGTGATTACGATATAACTATGGCAAATTGGGGACCTGACTATAAAGACCCAATTAGTTATTTAGAATTATTTA
CGACAGGTAATCCGAATAATAAAATGAATTACTCTAATTCTCGTTATGATGAATTAATAAAGAAAGCGAAAACGGATTTT
GTACTAGAACCAGAGAAACGATGGGAAGCATTGCTAGAAGCTGAGCAGGTATTATTAGAAGATGCAGCTGTAGCGCCGCT
GTATCATATTGGTTCAGCATATGTACAAAAGGATTACGTAAAGGGAATTGAAAAGCATCAATTTGGTGGTGTTTATACTT
ATAAGAATGCTTATATTGCTAATAAATAA

Upstream 100 bases:

>100_bases
TGAACGAATAAATATTCAAAAGAATGTCGCATCTTTCTGGTAGTATTTCTGCTATAATATATAACGTTTTATAATATTAT
ATTTTTAAGGAGAACAACTT

Downstream 100 bases:

>100_bases
ATACAAAAAACCTTACTTATTAAAAGTAAGGTTTTTTTACAGAGGACAGGGAAATCCTTTGGTGGTGTACCAAACATATA
AAGAAGATAAATGCAAAATT

Product: oligopeptide ABC transporter substrate-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKWKKSHLMVMALVISLLLTACNNKENKSDAESKKQVLNVTVSEEIPSLDTAKTMDGTSAHVMQNIFEGLYVLDDQDQPI
PAVAKSFKRSEDGKKYTFDLRKDAKWSNGDNVTAHDFMFAWKRAIAPETASQYASMLFYVKNAKEINKGTMSLDELGVTV
INDYKLEVELEQPIPYFLQLLALPIYLPQHESFLKEQGKNYALEPSNLLYNGPFILEKWKHEQEFQLKKNATYWDQKKVK
LDEINFQIVKDTMTAVNLYEAGNLDRVPINSQFVDKYKGNKELHMSSDSGIAMLRFNEKNNILANKKVRQSISLALNKED
FVAHFINNGAKPASGLVPASHINEETGKDFRKENGNLSSYDLQNAKKIWKEAKKELGVEQVNLELLTFEQDNAKRMAEYI
KGDLEKNLQGLTIQIKQQPFKQKLQLEQTGDYDITMANWGPDYKDPISYLELFTTGNPNNKMNYSNSRYDELIKKAKTDF
VLEPEKRWEALLEAEQVLLEDAAVAPLYHIGSAYVQKDYVKGIEKHQFGGVYTYKNAYIANK

Sequences:

>Translated_542_residues
MKWKKSHLMVMALVISLLLTACNNKENKSDAESKKQVLNVTVSEEIPSLDTAKTMDGTSAHVMQNIFEGLYVLDDQDQPI
PAVAKSFKRSEDGKKYTFDLRKDAKWSNGDNVTAHDFMFAWKRAIAPETASQYASMLFYVKNAKEINKGTMSLDELGVTV
INDYKLEVELEQPIPYFLQLLALPIYLPQHESFLKEQGKNYALEPSNLLYNGPFILEKWKHEQEFQLKKNATYWDQKKVK
LDEINFQIVKDTMTAVNLYEAGNLDRVPINSQFVDKYKGNKELHMSSDSGIAMLRFNEKNNILANKKVRQSISLALNKED
FVAHFINNGAKPASGLVPASHINEETGKDFRKENGNLSSYDLQNAKKIWKEAKKELGVEQVNLELLTFEQDNAKRMAEYI
KGDLEKNLQGLTIQIKQQPFKQKLQLEQTGDYDITMANWGPDYKDPISYLELFTTGNPNNKMNYSNSRYDELIKKAKTDF
VLEPEKRWEALLEAEQVLLEDAAVAPLYHIGSAYVQKDYVKGIEKHQFGGVYTYKNAYIANK
>Mature_542_residues
MKWKKSHLMVMALVISLLLTACNNKENKSDAESKKQVLNVTVSEEIPSLDTAKTMDGTSAHVMQNIFEGLYVLDDQDQPI
PAVAKSFKRSEDGKKYTFDLRKDAKWSNGDNVTAHDFMFAWKRAIAPETASQYASMLFYVKNAKEINKGTMSLDELGVTV
INDYKLEVELEQPIPYFLQLLALPIYLPQHESFLKEQGKNYALEPSNLLYNGPFILEKWKHEQEFQLKKNATYWDQKKVK
LDEINFQIVKDTMTAVNLYEAGNLDRVPINSQFVDKYKGNKELHMSSDSGIAMLRFNEKNNILANKKVRQSISLALNKED
FVAHFINNGAKPASGLVPASHINEETGKDFRKENGNLSSYDLQNAKKIWKEAKKELGVEQVNLELLTFEQDNAKRMAEYI
KGDLEKNLQGLTIQIKQQPFKQKLQLEQTGDYDITMANWGPDYKDPISYLELFTTGNPNNKMNYSNSRYDELIKKAKTDF
VLEPEKRWEALLEAEQVLLEDAAVAPLYHIGSAYVQKDYVKGIEKHQFGGVYTYKNAYIANK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=519, Percent_Identity=29.4797687861272, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI87081878, Length=528, Percent_Identity=26.8939393939394, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI1789397, Length=523, Percent_Identity=26.5774378585086, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1789966, Length=483, Percent_Identity=26.7080745341615, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787052, Length=416, Percent_Identity=23.7980769230769, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787762, Length=463, Percent_Identity=22.4622030237581, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787551, Length=572, Percent_Identity=20.6293706293706, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1789887, Length=360, Percent_Identity=24.4444444444444, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62073; Mature: 62073

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWKKSHLMVMALVISLLLTACNNKENKSDAESKKQVLNVTVSEEIPSLDTAKTMDGTSA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEHHCCCCCCCCCCCCCCHH
HVMQNIFEGLYVLDDQDQPIPAVAKSFKRSEDGKKYTFDLRKDAKWSNGDNVTAHDFMFA
HHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
WKRAIAPETASQYASMLFYVKNAKEINKGTMSLDELGVTVINDYKLEVELEQPIPYFLQL
HHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCEEEEECEEEEEEECCCCHHHHHH
LALPIYLPQHESFLKEQGKNYALEPSNLLYNGPFILEKWKHEQEFQLKKNATYWDQKKVK
HHHHHCCCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHCCCHHHHHHCCCCCCCCCCCE
LDEINFQIVKDTMTAVNLYEAGNLDRVPINSQFVDKYKGNKELHMSSDSGIAMLRFNEKN
EECCCEEEEEHHHHHHEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEEECCCC
NILANKKVRQSISLALNKEDFVAHFINNGAKPASGLVPASHINEETGKDFRKENGNLSSY
CEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCH
DLQNAKKIWKEAKKELGVEQVNLELLTFEQDNAKRMAEYIKGDLEKNLQGLTIQIKQQPF
HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCH
KQKLQLEQTGDYDITMANWGPDYKDPISYLELFTTGNPNNKMNYSNSRYDELIKKAKTDF
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCC
VLEPEKRWEALLEAEQVLLEDAAVAPLYHIGSAYVQKDYVKGIEKHQFGGVYTYKNAYIA
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEC
NK
CC
>Mature Secondary Structure
MKWKKSHLMVMALVISLLLTACNNKENKSDAESKKQVLNVTVSEEIPSLDTAKTMDGTSA
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEHHCCCCCCCCCCCCCCHH
HVMQNIFEGLYVLDDQDQPIPAVAKSFKRSEDGKKYTFDLRKDAKWSNGDNVTAHDFMFA
HHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
WKRAIAPETASQYASMLFYVKNAKEINKGTMSLDELGVTVINDYKLEVELEQPIPYFLQL
HHHHCCCHHHHHHHHHHHHHHCHHHHCCCCCCHHHCCEEEEECEEEEEEECCCCHHHHHH
LALPIYLPQHESFLKEQGKNYALEPSNLLYNGPFILEKWKHEQEFQLKKNATYWDQKKVK
HHHHHCCCCHHHHHHHCCCCCCCCCCCEEECCCCHHHHHCCCHHHHHHCCCCCCCCCCCE
LDEINFQIVKDTMTAVNLYEAGNLDRVPINSQFVDKYKGNKELHMSSDSGIAMLRFNEKN
EECCCEEEEEHHHHHHEEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCEEEEEECCCC
NILANKKVRQSISLALNKEDFVAHFINNGAKPASGLVPASHINEETGKDFRKENGNLSSY
CEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCH
DLQNAKKIWKEAKKELGVEQVNLELLTFEQDNAKRMAEYIKGDLEKNLQGLTIQIKQQPF
HHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCH
KQKLQLEQTGDYDITMANWGPDYKDPISYLELFTTGNPNNKMNYSNSRYDELIKKAKTDF
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCC
VLEPEKRWEALLEAEQVLLEDAAVAPLYHIGSAYVQKDYVKGIEKHQFGGVYTYKNAYIA
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]