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The map label for this gene is yfiK [H]

Identifier: 118477263

GI number: 118477263

Start: 1714943

End: 1715644

Strand: Direct

Name: yfiK [H]

Synonym: BALH_1574

Alternate gene names: 118477263

Gene position: 1714943-1715644 (Clockwise)

Preceding gene: 118477258

Following gene: 118477264

Centisome position: 32.62

GC content: 33.76

Gene sequence:

>702_bases
GTGGGAAATGTTGCACAGAGAAAGGATGTGAATGTTAGTAGGGGGAGTTCCATACTAACAAACATGAAAATTAAAATATT
AATAGCGGATGATAACTCTTTTATAAGAGAAGGTATGAAAATTATTTTAAATACATATGAAGAGTTTGAAGTGGTAGATA
CAGTAAATGATGGGAAAGAAGCAGTGGAATATTGTAAAAAGAACGACGTTGATATCGCGCTTTTAGACGTTCGTATGCCA
AATATGAACGGGGTAGAGGCAACGAAATTGATTTGTGAAGAGACAGAAACGAAACCGCTTATTTTAACGACGTTCGATGA
TGATGAATATATTTTGGACGCAGTAAAAAACGGAGCGAAAGGTTATTTATTAAAAAATAATGATCCAGAGCGTATTCGTG
ATGCGATAAAAGGAGTATATAACGGTCAAACTGTTATGCAAGATGTAGTGCTTGATAAAATTAAGTGCAATTTAATGGGA
AGCAAAGAGGACGAATGTAAAATAGATACAAGTCTTTTTACAGAGAGAGAGCTTAGTATTATCGCGTTAATTGCGAAAGG
TTTTTCGAATAAAGAAATTTCAAAGCAACTTTTCATATCAGAAGGAACAATCGCAAATTATATTACATCGGTTTTAGGGA
AAACTGGACTCGAACATCGTACACAAATTGCGATTTATTATTTAACAGGGAAAGTAGATTAA

Upstream 100 bases:

>100_bases
ACCCTACACATGTTGTAAAAAAAGAATAATATATTTTTAAGAAGGAGGCTATATGAAAAAAGGTGTGAAAAAATGGTAAA
AAGAAGTATATAATGAGCAA

Downstream 100 bases:

>100_bases
TGTTATGGAATTTTGGTTAACTGTAAGTAAATTAATTGTCTTTATATATATTGTGTTCAGTTACATTTATTTAAATGTTG
TGAACTTACCGTGGATTATA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MGNVAQRKDVNVSRGSSILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGKEAVEYCKKNDVDIALLDVRMP
NMNGVEATKLICEETETKPLILTTFDDDEYILDAVKNGAKGYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKCNLMG
SKEDECKIDTSLFTERELSIIALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD

Sequences:

>Translated_233_residues
MGNVAQRKDVNVSRGSSILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGKEAVEYCKKNDVDIALLDVRMP
NMNGVEATKLICEETETKPLILTTFDDDEYILDAVKNGAKGYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKCNLMG
SKEDECKIDTSLFTERELSIIALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD
>Mature_232_residues
GNVAQRKDVNVSRGSSILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGKEAVEYCKKNDVDIALLDVRMPN
MNGVEATKLICEETETKPLILTTFDDDEYILDAVKNGAKGYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKCNLMGS
KEDECKIDTSLFTERELSIIALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD

Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=185, Percent_Identity=32.4324324324324, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788521, Length=211, Percent_Identity=31.2796208530806, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1787473, Length=202, Percent_Identity=29.7029702970297, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786747, Length=197, Percent_Identity=26.9035532994924, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790102, Length=201, Percent_Identity=23.3830845771144, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082052, Length=197, Percent_Identity=26.9035532994924, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26090; Mature: 25959

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNVAQRKDVNVSRGSSILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGKE
CCCCCCCCCCCCCCCCEEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHH
AVEYCKKNDVDIALLDVRMPNMNGVEATKLICEETETKPLILTTFDDDEYILDAVKNGAK
HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCC
GYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKCNLMGSKEDECKIDTSLFTERELSI
EEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCEECHHHHCHHHHHH
IALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD
EEEECCCCCCCCHHHHHEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure 
GNVAQRKDVNVSRGSSILTNMKIKILIADDNSFIREGMKIILNTYEEFEVVDTVNDGKE
CCCCCCCCCCCCCCCEEEECEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHH
AVEYCKKNDVDIALLDVRMPNMNGVEATKLICEETETKPLILTTFDDDEYILDAVKNGAK
HHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCC
GYLLKNNDPERIRDAIKGVYNGQTVMQDVVLDKIKCNLMGSKEDECKIDTSLFTERELSI
EEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCCCCEECHHHHCHHHHHH
IALIAKGFSNKEISKQLFISEGTIANYITSVLGKTGLEHRTQIAIYYLTGKVD
EEEECCCCCCCCHHHHHEECCCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]