| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118477246
Identifier: 118477246
GI number: 118477246
Start: 1699171
End: 1699944
Strand: Direct
Name: 118477246
Synonym: BALH_1554
Alternate gene names: NA
Gene position: 1699171-1699944 (Clockwise)
Preceding gene: 118477245
Following gene: 118477247
Centisome position: 32.32
GC content: 32.69
Gene sequence:
>774_bases GTGTTTAGTATGAGCGATATTTCAGAGAAGTTTTGGGATGCGTCGGTAGAGGAATTGAAAAAAGGGTATGTGTTTGATGA GGAAACGGAAGAGTATATTTGTTTAGCTTGTGGAGAAACGTTTATTAAGGGGGTTATTTATCAAGATAATCAAGTTTTGT ATGAAGCAGAGAAGTTTGTACAATTGCATGTGCAAAACGAGCATACGTCTATGTTTGATTATTTATTAAACCTTGATAAG AAGTATACAGGTTTAACCGATTTGCAAAAGAAAATGGTTCAGTTTTTCTATATGGGGCTGAATGATAAAGAGATTGTAAA AGAGATGGATGGCGGAAGTACTTCAACTATTCGCAATCATCGATTTACACTTCGAGAGAAAATGAAACAAGCAAAAGTAT TTTTAGCGTTAATGGAACTGTCAGAAGAAAAATCGAAAGTGCAAACGAAATTTGTACCTATTCATAGAACAGCAACGATG GTAGATGATCGTTACAATATTACAGAAGAAGAAAATGATGAAGTATTAAAAGCACATTTTACAGAAGGCTTAGATGGACC GCTTTCTAAATTCCCGAAAAAACAAAAGCGTAAATTAATTATATTACGCCATTTAGTGACGAAGTTTGATAGTAATAAAA AGTACACGGAAAAAGAAGTAAATACTATCATAGAAAGTGTATACCCAGATTTTGTGACTTTAAGAAGATATTTAATTGAA TATGGTTTTTTAGATAGAACAGATGATGGAAGCCAATATTGGGTGAAGTTATAA
Upstream 100 bases:
>100_bases AAACGAAACGTTGAAATGTTTATTTCGTTTATGTTAAGATGATGAAGTGATAATAAACGTTATTAAAATTTGTTTGTTTT AAAATGGACATTTTAAAGGA
Downstream 100 bases:
>100_bases TATATGGAGAAGAAAATGAATAGAAGCACATCGTTATAACAAATATACAAAGAGATGTAAGTTGAAAAACAGATTTTTAA TAAAAGGAGAAATGAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptional Regulator HTH Domain-Containing Protein; Regulatory Protein; LOW QUALITY PROTEIN LuxR Family Transcriptional Regulator
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MFSMSDISEKFWDASVEELKKGYVFDEETEEYICLACGETFIKGVIYQDNQVLYEAEKFVQLHVQNEHTSMFDYLLNLDK KYTGLTDLQKKMVQFFYMGLNDKEIVKEMDGGSTSTIRNHRFTLREKMKQAKVFLALMELSEEKSKVQTKFVPIHRTATM VDDRYNITEEENDEVLKAHFTEGLDGPLSKFPKKQKRKLIILRHLVTKFDSNKKYTEKEVNTIIESVYPDFVTLRRYLIE YGFLDRTDDGSQYWVKL
Sequences:
>Translated_257_residues MFSMSDISEKFWDASVEELKKGYVFDEETEEYICLACGETFIKGVIYQDNQVLYEAEKFVQLHVQNEHTSMFDYLLNLDK KYTGLTDLQKKMVQFFYMGLNDKEIVKEMDGGSTSTIRNHRFTLREKMKQAKVFLALMELSEEKSKVQTKFVPIHRTATM VDDRYNITEEENDEVLKAHFTEGLDGPLSKFPKKQKRKLIILRHLVTKFDSNKKYTEKEVNTIIESVYPDFVTLRRYLIE YGFLDRTDDGSQYWVKL >Mature_257_residues MFSMSDISEKFWDASVEELKKGYVFDEETEEYICLACGETFIKGVIYQDNQVLYEAEKFVQLHVQNEHTSMFDYLLNLDK KYTGLTDLQKKMVQFFYMGLNDKEIVKEMDGGSTSTIRNHRFTLREKMKQAKVFLALMELSEEKSKVQTKFVPIHRTATM VDDRYNITEEENDEVLKAHFTEGLDGPLSKFPKKQKRKLIILRHLVTKFDSNKKYTEKEVNTIIESVYPDFVTLRRYLIE YGFLDRTDDGSQYWVKL
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30401; Mature: 30401
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSMSDISEKFWDASVEELKKGYVFDEETEEYICLACGETFIKGVIYQDNQVLYEAEKFV CCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHCEEECCCHHHHHHHHHH QLHVQNEHTSMFDYLLNLDKKYTGLTDLQKKMVQFFYMGLNDKEIVKEMDGGSTSTIRNH EEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH RFTLREKMKQAKVFLALMELSEEKSKVQTKFVPIHRTATMVDDRYNITEEENDEVLKAHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCCCCCCHHHHHHHH TEGLDGPLSKFPKKQKRKLIILRHLVTKFDSNKKYTEKEVNTIIESVYPDFVTLRRYLIE HCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH YGFLDRTDDGSQYWVKL HCCCCCCCCCCEEEEEC >Mature Secondary Structure MFSMSDISEKFWDASVEELKKGYVFDEETEEYICLACGETFIKGVIYQDNQVLYEAEKFV CCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHHCEEECCCHHHHHHHHHH QLHVQNEHTSMFDYLLNLDKKYTGLTDLQKKMVQFFYMGLNDKEIVKEMDGGSTSTIRNH EEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHH RFTLREKMKQAKVFLALMELSEEKSKVQTKFVPIHRTATMVDDRYNITEEENDEVLKAHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHCCCCCCCCCCCHHHHHHHH TEGLDGPLSKFPKKQKRKLIILRHLVTKFDSNKKYTEKEVNTIIESVYPDFVTLRRYLIE HCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH YGFLDRTDDGSQYWVKL HCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA