| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yfiS [H]
Identifier: 118477215
GI number: 118477215
Start: 1666219
End: 1667487
Strand: Direct
Name: yfiS [H]
Synonym: BALH_1520
Alternate gene names: 118477215
Gene position: 1666219-1667487 (Clockwise)
Preceding gene: 118477208
Following gene: 118477216
Centisome position: 31.69
GC content: 35.38
Gene sequence:
>1269_bases ATGGAAGATGTAAGTATAGGTCAAACTGATTCAAGAATGAAAATTGCAACGAGAAATATCATTTTAATGATGATTGGAAA AATGACGTCTTTATTAGGCGCAGGTATTTATACGTTCGCAATGGGGTTATACGTATTAAAGACAACGGGTTCAGGGATGG GGTTTGCAACTACGCTCGTTTGCGGGTCACTTCCACGGATGATTTGTGGACCAATTGCTGGTGCTGTAGCTGACCGTGTG AGTCGAAGATGGCTTGTCGTCGGTACAGATTTATTAAGTAGTTTAACGATGCTTATTATGTTTATTCTTGCTACTATATT TGGACCATCACTTCTTTTTATTTATATTTCAGCAGCATTATTATCAATTTGTGCAAGTTTTTATTCTGTTGCATTAACTT CGTCTATTCCTAATTTAGTAGATGAAGGGCGTATTCAGAAAGCGAGTGCTTTAAATCAAACGGCAGCTTCTTTATCAAAT ATTTTAGGGCCAATTATTGGCGGAGTTGTATTTGGTTTCTTTTCAATTCAGTCGTTCTTTTTGTTAAATAGTATTACATT CTTTTTAGCGGTTATTTTGCAATTATTTATCGTATTTGATTTATATAAAAAAGAAGTGGCTGAGAGTAAAGAGCATTTCT TAACGAGTATAAAAGAAGGATTTTCATATGTAAAACGACAACATGAAATATATGGTTTAATGAAAATAGCATTGTGGGTA AACTTTTTTGCGTGTGGGTTAACCGTTGCACTTCCATACATTATCGTTCATACATTGCATTTATCTTCAAAGCAACTCGG TATTGTTGAGGGAATGTTGGCAGTCGGGATGCTAATGGGTGCGATTGCTTTATCAGTGCGTAAAGAAGTGAATAATCCGT TTCGTTCTATTTATACTGGACTGTTTTTATTTGCGGGTTTAAGTTTATGTACAGTCTTTCCGTTGTTAGTTATCATTCCA AAAGTAGCAAGTTTTATTTACTATATTGCTTTCATGATGTTAACTGGTATAGCAATTATGATTGTAAATATTCCAATGCA AGTACATATGCAAAAAACGACAGATCCGAGCTACTTAGGGCGTGTGTTTGGCCTACTTGAAACAATTGCGACTGCAATCG CACCGCTCGGTATGATTGTATATGGATTATTATTAGATATGTTGCCAACTAGCATTGTTATGATGACAATAGGCGGAGGT TTATTGTTAGTTGTATTAGTTGGAGTAAAGCAACATATGGCGAAAAAACAAGTAGATGTGTCGGCTTAA
Upstream 100 bases:
>100_bases TTAAAAAGTTAAATACAATTAAACTTTTTGTTGTAATAATTGGAAAGTTGATTATATAATAAGTTTAACACAATTTAACT TTTAAGGGGAGAGTGTCATA
Downstream 100 bases:
>100_bases AAACAAGAAAATAATAAAAATGACCAAATTAGTATTTTAGTTTTTGAAACTCTTTTTCATGTATGTTACAGTATAGTGAG CAGGCAAAGAAAAGGAGACA
Product: multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MEDVSIGQTDSRMKIATRNIILMMIGKMTSLLGAGIYTFAMGLYVLKTTGSGMGFATTLVCGSLPRMICGPIAGAVADRV SRRWLVVGTDLLSSLTMLIMFILATIFGPSLLFIYISAALLSICASFYSVALTSSIPNLVDEGRIQKASALNQTAASLSN ILGPIIGGVVFGFFSIQSFFLLNSITFFLAVILQLFIVFDLYKKEVAESKEHFLTSIKEGFSYVKRQHEIYGLMKIALWV NFFACGLTVALPYIIVHTLHLSSKQLGIVEGMLAVGMLMGAIALSVRKEVNNPFRSIYTGLFLFAGLSLCTVFPLLVIIP KVASFIYYIAFMMLTGIAIMIVNIPMQVHMQKTTDPSYLGRVFGLLETIATAIAPLGMIVYGLLLDMLPTSIVMMTIGGG LLLVVLVGVKQHMAKKQVDVSA
Sequences:
>Translated_422_residues MEDVSIGQTDSRMKIATRNIILMMIGKMTSLLGAGIYTFAMGLYVLKTTGSGMGFATTLVCGSLPRMICGPIAGAVADRV SRRWLVVGTDLLSSLTMLIMFILATIFGPSLLFIYISAALLSICASFYSVALTSSIPNLVDEGRIQKASALNQTAASLSN ILGPIIGGVVFGFFSIQSFFLLNSITFFLAVILQLFIVFDLYKKEVAESKEHFLTSIKEGFSYVKRQHEIYGLMKIALWV NFFACGLTVALPYIIVHTLHLSSKQLGIVEGMLAVGMLMGAIALSVRKEVNNPFRSIYTGLFLFAGLSLCTVFPLLVIIP KVASFIYYIAFMMLTGIAIMIVNIPMQVHMQKTTDPSYLGRVFGLLETIATAIAPLGMIVYGLLLDMLPTSIVMMTIGGG LLLVVLVGVKQHMAKKQVDVSA >Mature_422_residues MEDVSIGQTDSRMKIATRNIILMMIGKMTSLLGAGIYTFAMGLYVLKTTGSGMGFATTLVCGSLPRMICGPIAGAVADRV SRRWLVVGTDLLSSLTMLIMFILATIFGPSLLFIYISAALLSICASFYSVALTSSIPNLVDEGRIQKASALNQTAASLSN ILGPIIGGVVFGFFSIQSFFLLNSITFFLAVILQLFIVFDLYKKEVAESKEHFLTSIKEGFSYVKRQHEIYGLMKIALWV NFFACGLTVALPYIIVHTLHLSSKQLGIVEGMLAVGMLMGAIALSVRKEVNNPFRSIYTGLFLFAGLSLCTVFPLLVIIP KVASFIYYIAFMMLTGIAIMIVNIPMQVHMQKTTDPSYLGRVFGLLETIATAIAPLGMIVYGLLLDMLPTSIVMMTIGGG LLLVVLVGVKQHMAKKQVDVSA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45762; Mature: 45762
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDVSIGQTDSRMKIATRNIILMMIGKMTSLLGAGIYTFAMGLYVLKTTGSGMGFATTLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH CGSLPRMICGPIAGAVADRVSRRWLVVGTDLLSSLTMLIMFILATIFGPSLLFIYISAAL HHCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSICASFYSVALTSSIPNLVDEGRIQKASALNQTAASLSNILGPIIGGVVFGFFSIQSFF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNSITFFLAVILQLFIVFDLYKKEVAESKEHFLTSIKEGFSYVKRQHEIYGLMKIALWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFFACGLTVALPYIIVHTLHLSSKQLGIVEGMLAVGMLMGAIALSVRKEVNNPFRSIYTG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LFLFAGLSLCTVFPLLVIIPKVASFIYYIAFMMLTGIAIMIVNIPMQVHMQKTTDPSYLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHH RVFGLLETIATAIAPLGMIVYGLLLDMLPTSIVMMTIGGGLLLVVLVGVKQHMAKKQVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC SA CC >Mature Secondary Structure MEDVSIGQTDSRMKIATRNIILMMIGKMTSLLGAGIYTFAMGLYVLKTTGSGMGFATTLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH CGSLPRMICGPIAGAVADRVSRRWLVVGTDLLSSLTMLIMFILATIFGPSLLFIYISAAL HHCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSICASFYSVALTSSIPNLVDEGRIQKASALNQTAASLSNILGPIIGGVVFGFFSIQSFF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNSITFFLAVILQLFIVFDLYKKEVAESKEHFLTSIKEGFSYVKRQHEIYGLMKIALWV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFFACGLTVALPYIIVHTLHLSSKQLGIVEGMLAVGMLMGAIALSVRKEVNNPFRSIYTG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LFLFAGLSLCTVFPLLVIIPKVASFIYYIAFMMLTGIAIMIVNIPMQVHMQKTTDPSYLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHH RVFGLLETIATAIAPLGMIVYGLLLDMLPTSIVMMTIGGGLLLVVLVGVKQHMAKKQVDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]