| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is fliD [H]
Identifier: 118477176
GI number: 118477176
Start: 1629286
End: 1630662
Strand: Direct
Name: fliD [H]
Synonym: BALH_1481
Alternate gene names: 118477176
Gene position: 1629286-1630662 (Clockwise)
Preceding gene: 118477175
Following gene: 118477177
Centisome position: 30.99
GC content: 33.91
Gene sequence:
>1377_bases ATGGCAGGAACATTAACGGGTATCGGCGGTAGACAACAAATATGGAACCTCGGAAATAATATGATCGATACATCTAACTT TGTAGAATTAGAAATGCAAGCGTTAGAAATGAGAAAGACGCCTTATGCTAATGAAAAGAACCAACTTTCACAAGATAAAC TATTATATACAAGTTTAAAATCAGAATTTAGCTCTTTTACGCAAACTTTTAAAAACTTAGCGGCTTTTAAAGGAAATGAG AAAAAGGTAACAACATCACAAGACGGTTATGTTAATGTAAAAGCTGATGGTGGCGCGATCGCTGGAACTTTTAATATGAC GATTACACAGCTTGCGCAGCGTCATCAAATAGCTTCTAAAGAAATTGATGTAGATGCAAAGCTTAATAGAGATGAAACAT TAAAACTAGGTGGTAAAGAATTAAAAGTAACACCTGATATGACATATAAAGATTTAATTAATAAAATTAATGATGGAGAT TACGGCGTATCAGCTTATACACTTGGGAATAAAATTTTCATGACCTCAAAAAAAGAGGGAGAAGATGGAGTAATTAATTT TAAGGACAATACATCTACATTGTTTCAAGATATAGGGTTAGCTAATAAGGATGGCGTAGCGGTTAATGTAATTAATGAAG CGCAAAATGCTGAATATACGATTAATGGTATTAAAGGTAAAAGTTCTACCAATACAGTTGAAGCTCTTCCAGGTGTGAAA ATTGAATTATTGAAAGTAACTGAGCCGAAAGTAGAAGGAACACCAGATGCAGGTACAACAACAGAACCAAAAGCAAAAGG GATAGATCTAAAATTCACAGTAAGTGACTCAAACGTAACAGACGCAGCAAATGTTATTAAAAAAATGGTTGCGGATTATA ATAAAGCTGTTTCTACAGTAGATATCTTTGCTGGAAAAGGCGGGGCATTCCAAGGCCAAGCTATTATGCAAAGTGTGCGT CAAGCTATGAACAATGTTGTAACTTTTTCACAAGATGGTAATTACTTATTCTCATTTGGTATTCAATTAAAACAAGATGG AACGATGGAAGTTAATGATGAAGCATTAACGAAAGCGTTAAAAGAAAAACCGGATGCAGCGAAGCAATTTTTCTTTAGTT CTAACGGTTTAGGAAAAATGATGGAAGAGCCACTTGATAAGTTATTTGGTGATAAAGGTGTAGTCGGAGAGAGAGTAAAA AGCATTGACTCACGTGTAAGTGATTTAGATAAAAAGATTAAAGATATTGAGACGCAAAACTTGCAAAAACAAGATGAAAT TGTGAAGAAGTATCAAAAACTAGAGAGTACATTAGCGGCGCTAGATAGCCAATTAAAAACAATTAAAGCAATGACAAAAC AAAAAAGTGATGATTAA
Upstream 100 bases:
>100_bases CTTATATAAACGCAACGTATGAAGCTACGTTAAAAGCTGTTAGTACGATGAGTAAAACGAGTATTTTAGACTACATGTAA TCTATAAGGAGTGAGAAATT
Downstream 100 bases:
>100_bases TGAAAGGTAAGGAAGTGATTGTATGCAAGCATGGCAACGTTATATGCAAAATGATATTATGACGAGTAATCCGATTAAAA ATACAATTTTTATTTATGAA
Product: flagellar capping protein
Products: NA
Alternate protein names: HAP2; Filament cap protein [H]
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MAGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE KKVTTSQDGYVNVKADGGAIAGTFNMTITQLAQRHQIASKEIDVDAKLNRDETLKLGGKELKVTPDMTYKDLINKINDGD YGVSAYTLGNKIFMTSKKEGEDGVINFKDNTSTLFQDIGLANKDGVAVNVINEAQNAEYTINGIKGKSSTNTVEALPGVK IELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQSVR QAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVK SIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
Sequences:
>Translated_458_residues MAGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNE KKVTTSQDGYVNVKADGGAIAGTFNMTITQLAQRHQIASKEIDVDAKLNRDETLKLGGKELKVTPDMTYKDLINKINDGD YGVSAYTLGNKIFMTSKKEGEDGVINFKDNTSTLFQDIGLANKDGVAVNVINEAQNAEYTINGIKGKSSTNTVEALPGVK IELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQSVR QAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVK SIDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD >Mature_457_residues AGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLKSEFSSFTQTFKNLAAFKGNEK KVTTSQDGYVNVKADGGAIAGTFNMTITQLAQRHQIASKEIDVDAKLNRDETLKLGGKELKVTPDMTYKDLINKINDGDY GVSAYTLGNKIFMTSKKEGEDGVINFKDNTSTLFQDIGLANKDGVAVNVINEAQNAEYTINGIKGKSSTNTVEALPGVKI ELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTVDIFAGKGGAFQGQAIMQSVRQ AMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKALKEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKS IDSRVSDLDKKIKDIETQNLQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD
Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the
COG id: COG1345
COG function: function code N; Flagellar capping protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliD family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010810 - InterPro: IPR010809 - InterPro: IPR003481 [H]
Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]
EC number: NA
Molecular weight: Translated: 50149; Mature: 50018
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLK CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHH SEFSSFTQTFKNLAAFKGNEKKVTTSQDGYVNVKADGGAIAGTFNMTITQLAQRHQIASK HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHH EIDVDAKLNRDETLKLGGKELKVTPDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKEG CCCCCCCCCCCCEEEECCCEEEECCCCCHHHHHHHCCCCCCCEEEEEECCEEEEECCCCC EDGVINFKDNTSTLFQDIGLANKDGVAVNVINEAQNAEYTINGIKGKSSTNTVEALPGVK CCCEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCE IELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTV EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEE DIFAGKGGAFQGQAIMQSVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKAL EEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCEEEEEEEEEECCCCEEECHHHHHHHH KEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKDIETQN HHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC LQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AGTLTGIGGRQQIWNLGNNMIDTSNFVELEMQALEMRKTPYANEKNQLSQDKLLYTSLK CCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHH SEFSSFTQTFKNLAAFKGNEKKVTTSQDGYVNVKADGGAIAGTFNMTITQLAQRHQIASK HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHH EIDVDAKLNRDETLKLGGKELKVTPDMTYKDLINKINDGDYGVSAYTLGNKIFMTSKKEG CCCCCCCCCCCCEEEECCCEEEECCCCCHHHHHHHCCCCCCCEEEEEECCEEEEECCCCC EDGVINFKDNTSTLFQDIGLANKDGVAVNVINEAQNAEYTINGIKGKSSTNTVEALPGVK CCCEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCHHHCCCCE IELLKVTEPKVEGTPDAGTTTEPKAKGIDLKFTVSDSNVTDAANVIKKMVADYNKAVSTV EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEE DIFAGKGGAFQGQAIMQSVRQAMNNVVTFSQDGNYLFSFGIQLKQDGTMEVNDEALTKAL EEEECCCCCCCCHHHHHHHHHHHHHCEEEECCCCEEEEEEEEEECCCCEEECHHHHHHHH KEKPDAAKQFFFSSNGLGKMMEEPLDKLFGDKGVVGERVKSIDSRVSDLDKKIKDIETQN HHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC LQKQDEIVKKYQKLESTLAALDSQLKTIKAMTKQKSDD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10678962; 10984043 [H]