| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is cca [H]
Identifier: 118477089
GI number: 118477089
Start: 1528063
End: 1529265
Strand: Direct
Name: cca [H]
Synonym: BALH_1390
Alternate gene names: 118477089
Gene position: 1528063-1529265 (Clockwise)
Preceding gene: 118477088
Following gene: 118477090
Centisome position: 29.07
GC content: 37.32
Gene sequence:
>1203_bases ATGACAAAAATGGAAATATTTAAAAAAGCTAGTTCTATTATTGAGACTTTAAAGCAACAAGGACATGAGGCTTACTTTGT CGGTGGAAGCGTAAGAGATCTTATTATCGATAGGCCGATTGGAGATATTGATATTGCGACATCTGCTTTACCAGAGGAAG TGATGGGGATATTTCCAAGACATGTTCCTGTTGGTCTTGAACATGGAACTGTAATTGTAGTAGAAAATGGTGAGCCTTAT GAGGTAACCACTTTTCGAACAGAGAGTGAATATGAAGATTTTCGAAGACCTAGTAGTGTTCAATTTGTTCGTTCGTTAGA AGAGGATTTAAAACGTCGTGATTTCACAATGAATGCAATTGCCATGACGGAAGAAGGCGAAATGGTTGATTTATTTGCAG GACAGGAAGCGATTCAAAAGAGAGAAATTGTGACAGTGGGAAATGCTGCGGATCGTTTTCAAGAAGATGCCCTGCGAATG ATGCGTGGTATTCGGTTCGTAAGTACGTTAGGTTTTTCTTTAGAGACGAAAACGAAACAAGCAATTGAAACATATGGACA TTTGCTGGAACATATAGCAATTGAGAGAATTACAGTGGAGTTTGAAAAACTGTTAACTGGCACATATTGCGTGAAGGGTC TCAAAGAATTAGTGGAAACGAAACTATTTTCTCATCTGCCATATCTACAAATGTCAGAAGAGAGATTATTAAAAGCTACG CAGTATAACTGGGATTCTTTTGAAACAGACATTGAGGCATGGGCGTTTTTCTTATATTGTATTGGAGAAGAACATCCATC TGTCTTTTTACGTCAATGGAAGTTTTCAAATAAAAAAATAAAAGATATCGTCGCAGTTTTATTAACAATCCGTAAGAGAA AGGAGAAGGATTGGGATACAGTCCTTCTTTATAAAACGGGAATTCATATAGCTGAAATGTCAGAAAGAGTATATGAAGCG ATGATTGAAAGCTATGACAATACATCTGTGAAACGAGTGCAAACGTTGTTTGAAGCATTGCCAATCAAGAGTCGACAAGA AATGAATGTGACTGGTAATGATTTATTAAACTGGGCAAATAAAAAACCAGGTCCGTGGGTTGCTGAAATGATTCAAAACA TCGAGGAAGCAATCGTACAAGGAAACGTAGTGAATGAGAAAGAGTGTATAAGGGAGTGGCTGCAAGAATGCAATCTACTA TAA
Upstream 100 bases:
>100_bases CGTAATATGGGAGAGCGAGCAAGAGCAAGTGTCTACGAGCAGTTCCGCTCTGAAAAAATCGTATCACAATATGAAACGAT TTACTATGATATACTAAGGG
Downstream 100 bases:
>100_bases GAAAGCAGTTATTGCAAGTTTTTTCTGAGGCGGATGGAGAGTTTGTATCTGGCCAAACGATTAGTGATAAACTTGGTTGC TCGAGAACCGCTGTGTGGAA
Product: tRNA CCA-pyrophosphorylase
Products: NA
Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTKMEIFKKASSIIETLKQQGHEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMGIFPRHVPVGLEHGTVIVVENGEPY EVTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAIAMTEEGEMVDLFAGQEAIQKREIVTVGNAADRFQEDALRM MRGIRFVSTLGFSLETKTKQAIETYGHLLEHIAIERITVEFEKLLTGTYCVKGLKELVETKLFSHLPYLQMSEERLLKAT QYNWDSFETDIEAWAFFLYCIGEEHPSVFLRQWKFSNKKIKDIVAVLLTIRKRKEKDWDTVLLYKTGIHIAEMSERVYEA MIESYDNTSVKRVQTLFEALPIKSRQEMNVTGNDLLNWANKKPGPWVAEMIQNIEEAIVQGNVVNEKECIREWLQECNLL
Sequences:
>Translated_400_residues MTKMEIFKKASSIIETLKQQGHEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMGIFPRHVPVGLEHGTVIVVENGEPY EVTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAIAMTEEGEMVDLFAGQEAIQKREIVTVGNAADRFQEDALRM MRGIRFVSTLGFSLETKTKQAIETYGHLLEHIAIERITVEFEKLLTGTYCVKGLKELVETKLFSHLPYLQMSEERLLKAT QYNWDSFETDIEAWAFFLYCIGEEHPSVFLRQWKFSNKKIKDIVAVLLTIRKRKEKDWDTVLLYKTGIHIAEMSERVYEA MIESYDNTSVKRVQTLFEALPIKSRQEMNVTGNDLLNWANKKPGPWVAEMIQNIEEAIVQGNVVNEKECIREWLQECNLL >Mature_399_residues TKMEIFKKASSIIETLKQQGHEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMGIFPRHVPVGLEHGTVIVVENGEPYE VTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAIAMTEEGEMVDLFAGQEAIQKREIVTVGNAADRFQEDALRMM RGIRFVSTLGFSLETKTKQAIETYGHLLEHIAIERITVEFEKLLTGTYCVKGLKELVETKLFSHLPYLQMSEERLLKATQ YNWDSFETDIEAWAFFLYCIGEEHPSVFLRQWKFSNKKIKDIVAVLLTIRKRKEKDWDTVLLYKTGIHIAEMSERVYEAM IESYDNTSVKRVQTLFEALPIKSRQEMNVTGNDLLNWANKKPGPWVAEMIQNIEEAIVQGNVVNEKECIREWLQECNLL
Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing
COG id: COG0617
COG function: function code J; tRNA nucleotidyltransferase/poly(A) polymerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 3 subfamily [H]
Homologues:
Organism=Homo sapiens, GI155030240, Length=206, Percent_Identity=32.5242718446602, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI87081691, Length=237, Percent_Identity=32.0675105485232, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789436, Length=190, Percent_Identity=32.6315789473684, Blast_Score=81, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71995920, Length=268, Percent_Identity=29.4776119402985, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI281360112, Length=269, Percent_Identity=29.7397769516729, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI21357337, Length=269, Percent_Identity=29.7397769516729, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023068 - InterPro: IPR002646 [H]
Pfam domain/function: PF01743 PolyA_pol [H]
EC number: =2.7.7.21; =2.7.7.25 [H]
Molecular weight: Translated: 46241; Mature: 46109
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKMEIFKKASSIIETLKQQGHEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMGIFPR CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHHHHHHHCHHHHHHHCCC HVPVGLEHGTVIVVENGEPYEVTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAI CCCCCCCCCEEEEEECCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEE AMTEEGEMVDLFAGQEAIQKREIVTVGNAADRFQEDALRMMRGIRFVSTLGFSLETKTKQ EEECCCCEEEECCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AIETYGHLLEHIAIERITVEFEKLLTGTYCVKGLKELVETKLFSHLPYLQMSEERLLKAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHH QYNWDSFETDIEAWAFFLYCIGEEHPSVFLRQWKFSNKKIKDIVAVLLTIRKRKEKDWDT HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCE VLLYKTGIHIAEMSERVYEAMIESYDNTSVKRVQTLFEALPIKSRQEMNVTGNDLLNWAN EEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC KKPGPWVAEMIQNIEEAIVQGNVVNEKECIREWLQECNLL CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TKMEIFKKASSIIETLKQQGHEAYFVGGSVRDLIIDRPIGDIDIATSALPEEVMGIFPR CHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCHHHHHHHCHHHHHHHCCC HVPVGLEHGTVIVVENGEPYEVTTFRTESEYEDFRRPSSVQFVRSLEEDLKRRDFTMNAI CCCCCCCCCEEEEEECCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEE AMTEEGEMVDLFAGQEAIQKREIVTVGNAADRFQEDALRMMRGIRFVSTLGFSLETKTKQ EEECCCCEEEECCCHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AIETYGHLLEHIAIERITVEFEKLLTGTYCVKGLKELVETKLFSHLPYLQMSEERLLKAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHH QYNWDSFETDIEAWAFFLYCIGEEHPSVFLRQWKFSNKKIKDIVAVLLTIRKRKEKDWDT HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCE VLLYKTGIHIAEMSERVYEAMIESYDNTSVKRVQTLFEALPIKSRQEMNVTGNDLLNWAN EEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC KKPGPWVAEMIQNIEEAIVQGNVVNEKECIREWLQECNLL CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA