| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ypjH [H]
Identifier: 118477088
GI number: 118477088
Start: 1526940
End: 1528085
Strand: Direct
Name: ypjH [H]
Synonym: BALH_1389
Alternate gene names: 118477088
Gene position: 1526940-1528085 (Clockwise)
Preceding gene: 118477087
Following gene: 118477089
Centisome position: 29.05
GC content: 36.91
Gene sequence:
>1146_bases ATGAAATTAAAAATAGGTATTACATGTTATCCTTCTGTAGGTGGTTCTGGAGTTGTTGGAACAGAATTAGGAAAGCAATT AGCGGAACGCGGGCATGAAATTCATTTTATTACATCGGGTTTACCATTCCGGTTAAATAAAGTGTATCCAAACATTTATT TTCATGAAGTGACGGTAAATCAATACTCTGTATTCCAATATCCACCATACGATTTAGCGTTAGCGAGTAAAATGGCAGAG GTTGCACAAAGAGAAAACCTAGACATTTTACATGTGCATTACGCAATACCACATGCTATTTGTGCTTATTTAGCAAAACA AATGATTGGAGAGCGTATTAAAATTGTTACAACCTTGCATGGAACAGATATTACTGTGTTAGGATCCGACCCTTCGCTAA ATAATTTAATTCGTTTTGGTATTGAGCGATCTGATGTTGTGACGGCTGTCTCGCATTCATTAATTAACGAAACGCATGAG CTTGTAAAACCAAATAAAGACATTCAAACGGTATACAACTTTATAGACGAACGTGTATATTTCAAACGTGATATGACCCA ATTAAAGAAAGAATATGGTATAAGTGAGAGTGAAAAGATACTCATTCACATTTCAAACTTCCGTAAAGTGAAACGTGTGC AAGATGTTGTGCAGGCATTTGCTAAAATTGTTACAGAAGTAGATGCGAAGTTGCTTCTTGTTGGAGATGGACCAGAATTT TGCACGATTTTACAGTTGGTGAAAAATTTACATATTGAAGATCGCGTCTTATTCTTAGGGAAGCAAGATAATGTTGCAGA GCTACTAGCGATGAGTGATTTAATGTTGCTTTTATCAGAGAAGGAGAGTTTTGGTCTTGTTTTATTAGAAGCGATGGCGT GTGGTGTACCTTGTATTGGAACAAGGGTTGGAGGTATTCCAGAAGTCATTCAACATGGTGAAACAGGATATTTATGTGAA GTTGGCGATACGACGGGAGTGGCTAATCAAGCCATTCAGCTATTAAAGGATGAAGAACTTCACCGTAATATGGGAGAGCG AGCAAGAGCAAGTGTCTACGAGCAGTTCCGCTCTGAAAAAATCGTATCACAATATGAAACGATTTACTATGATATACTAA GGGATGACAAAAATGGAAATATTTAA
Upstream 100 bases:
>100_bases GTGAGAAAATGTTTGGAAAAGAAGTTGGAGTCTTATATGCCGAAGGATTTATGAGTAAGAAACCGGTTTTATTACATGCT GATTTAATAGGGGGATGTAA
Downstream 100 bases:
>100_bases AAAAGCTAGTTCTATTATTGAGACTTTAAAGCAACAAGGACATGAGGCTTACTTTGTCGGTGGAAGCGTAAGAGATCTTA TTATCGATAGGCCGATTGGA
Product: glycosyltransferase, group 1 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAE VAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIERSDVVTAVSHSLINETHE LVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEF CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGETGYLCE VGDTTGVANQAIQLLKDEELHRNMGERARASVYEQFRSEKIVSQYETIYYDILRDDKNGNI
Sequences:
>Translated_381_residues MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAE VAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIERSDVVTAVSHSLINETHE LVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEF CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGETGYLCE VGDTTGVANQAIQLLKDEELHRNMGERARASVYEQFRSEKIVSQYETIYYDILRDDKNGNI >Mature_381_residues MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAE VAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGSDPSLNNLIRFGIERSDVVTAVSHSLINETHE LVKPNKDIQTVYNFIDERVYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEF CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGETGYLCE VGDTTGVANQAIQLLKDEELHRNMGERARASVYEQFRSEKIVSQYETIYYDILRDDKNGNI
Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI226510984, Length=126, Percent_Identity=32.5396825396825, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32564184, Length=348, Percent_Identity=23.5632183908046, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI9755344, Length=399, Percent_Identity=24.5614035087719, Blast_Score=83, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR016040 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 42827; Mature: 42827
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVN CEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEEEEEC QYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLH CEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEE GTDITVLGSDPSLNNLIRFGIERSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVY CCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEF HHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHH CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIG HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC TRVGGIPEVIQHGETGYLCEVGDTTGVANQAIQLLKDEELHRNMGERARASVYEQFRSEK CCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSQYETIYYDILRDDKNGNI HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVN CEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEEEEEEEEC QYSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLH CEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEE GTDITVLGSDPSLNNLIRFGIERSDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVY CCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEF HHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHH CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIG HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCC TRVGGIPEVIQHGETGYLCEVGDTTGVANQAIQLLKDEELHRNMGERARASVYEQFRSEK CCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVSQYETIYYDILRDDKNGNI HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]