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The map label for this gene is liaH [H]

Identifier: 118476995

GI number: 118476995

Start: 1437795

End: 1438532

Strand: Direct

Name: liaH [H]

Synonym: BALH_1293

Alternate gene names: 118476995

Gene position: 1437795-1438532 (Clockwise)

Preceding gene: 118476994

Following gene: 118476996

Centisome position: 27.35

GC content: 33.88

Gene sequence:

>738_bases
GTGGAACAAGTTAATGAAAAACTAATAAAAAATAAATCAAATCAAATTTATAAAGTAGAAGAGAGGAAGATTATAATGAA
ACAATCTTTATTCGGACGTGTACGCGATGCAATTTTAGCAGATTTTCATAATGTATTAGATGAGAAAGAAAGAAAAAACC
CAATTGCTATGTTAAACCAATATTTACGCGATAGTGAGCGTGAAATAACAAAAATTGAGAAGTTAATTCAGCGTCATAAA
ACATTAAAATCGAACTTTGCTCGTGAACTTGAGCAAGCACGATATTTCGTTAATAAAAGATCAAAGCAAGCAATTATTGC
TCAAGAAGCAGGCGAACTGCAACTACATGAGCGTGCGTTAGAAGAAGTAGCTTATTACGAAGGGCAAGTGACTCGATTAG
AAGAAATGTATGCAGGTGTTGTAGAACAAATTGATGAGTTGGAGCGTCGTCTTTCTGAGATGAAAAATAAATTAAAAGAA
ATGCACGCGAAACGTATGGAATTAATGGCACGTGAAAATATGGCACATGCAAATCGTCGTATGAATACTGCGATGCATAA
AATGGATGAAAATAATCCATTCTTACGCTTTGAGGAAATTGAGGATCATATTCGTGACTTAGAAACTCGTATGAATGAGG
AGCATGAACGTGACACATTTGATATGAAAATTGCAAAGCTTGAGCGTGAAATGAAAGAAAAGAATGATGTATCGTTAACG
AAAGAGTTAACAAAATAA

Upstream 100 bases:

>100_bases
TAGTTTTATACTACGGATACCGTGAGTGGAAAAAAGAAAAAGATGTAGTTGTTGATTCTGCTCCAGAAAGTTCTAAACCA
TATAGCAACTTTGAAGATGA

Downstream 100 bases:

>100_bases
TAGTAGTATATTATAAAACAGGCTTATGATATAGTGATAGGAGAAAAGGTGTTGGAAAGCAATGCCTTTTCTTCTATGTA
TATGTGACAAGAAGGGGGGA

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MEQVNEKLIKNKSNQIYKVEERKIIMKQSLFGRVRDAILADFHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIQRHK
TLKSNFARELEQARYFVNKRSKQAIIAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKE
MHAKRMELMARENMAHANRRMNTAMHKMDENNPFLRFEEIEDHIRDLETRMNEEHERDTFDMKIAKLEREMKEKNDVSLT
KELTK

Sequences:

>Translated_245_residues
MEQVNEKLIKNKSNQIYKVEERKIIMKQSLFGRVRDAILADFHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIQRHK
TLKSNFARELEQARYFVNKRSKQAIIAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKE
MHAKRMELMARENMAHANRRMNTAMHKMDENNPFLRFEEIEDHIRDLETRMNEEHERDTFDMKIAKLEREMKEKNDVSLT
KELTK
>Mature_245_residues
MEQVNEKLIKNKSNQIYKVEERKIIMKQSLFGRVRDAILADFHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIQRHK
TLKSNFARELEQARYFVNKRSKQAIIAQEAGELQLHERALEEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKE
MHAKRMELMARENMAHANRRMNTAMHKMDENNPFLRFEEIEDHIRDLETRMNEEHERDTFDMKIAKLEREMKEKNDVSLT
KELTK

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 29524; Mature: 29524

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQVNEKLIKNKSNQIYKVEERKIIMKQSLFGRVRDAILADFHNVLDEKERKNPIAMLNQ
CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YLRDSEREITKIEKLIQRHKTLKSNFARELEQARYFVNKRSKQAIIAQEAGELQLHERAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKEMHAKRMELMARENMAHANRR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNTAMHKMDENNPFLRFEEIEDHIRDLETRMNEEHERDTFDMKIAKLEREMKEKNDVSLT
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELTK
HHHCC
>Mature Secondary Structure
MEQVNEKLIKNKSNQIYKVEERKIIMKQSLFGRVRDAILADFHNVLDEKERKNPIAMLNQ
CCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
YLRDSEREITKIEKLIQRHKTLKSNFARELEQARYFVNKRSKQAIIAQEAGELQLHERAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EEVAYYEGQVTRLEEMYAGVVEQIDELERRLSEMKNKLKEMHAKRMELMARENMAHANRR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNTAMHKMDENNPFLRFEEIEDHIRDLETRMNEEHERDTFDMKIAKLEREMKEKNDVSLT
HHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KELTK
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]