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The map label for this gene is yhdH [H]

Identifier: 118476989

GI number: 118476989

Start: 1430355

End: 1431713

Strand: Direct

Name: yhdH [H]

Synonym: BALH_1285

Alternate gene names: 118476989

Gene position: 1430355-1431713 (Clockwise)

Preceding gene: 118476988

Following gene: 118476991

Centisome position: 27.21

GC content: 35.39

Gene sequence:

>1359_bases
ATGATGAAAGAAACACAGCAATGGACGTCGAAAATAGGATTTGTACTCGCAGCAGCCGGAGCCGCAGTAGGTCTTGGTGC
GATATGGAAATTTCCATATGTTGCAGGTAATGGCGGAGGAGGCGCATTCTTCCTTGTATTTTTACTATTAACTTTATTTA
TAGGTATGCCGCTTCTATTAGCTGAATTTGTTATTGGACGTAGTACGCAAAAAGAGGCAGTTACAGCGTATAAAGTATTG
GTGCCAAATAGCAAGTTATATCCTTGGATTGGTCGTATGGGAGTTATTACTTGTTTTAGTGTACTATCTTTTTATAGTGT
TGTAGGTGGATGGATTTTACTGTATTTATACTATAGTATTACAGGAAGCTTCTGGAATGGTGTTGTTGATTACGGAAAAT
TGTTTAATGAAACGATTTCAAATCCGCTAAGTGCGATTGGAGCACAATTTATCTTTATGCTTTGTACGATTTTTGTTGTA
AGTAAAGGTGTAGAGAAAGGGATAGAAAAAGCAAGTAAGTATATGATGCCGCTATTATTTATTTTATTTATTGCGATCAT
TGTTCGTGCATTAACACTTGATGGTGCTTTTGCAGGAGTAGAGTTCTTTTTAAAACCTGATTTTTCAAAACTAACAGCAG
ATACGGTTTTATACGCGATGGGACAATCTTTCTTCTCGCTCACGGTAGGTGCCTCAGTAATGGTAACGTATAGTTCGTAT
TTGAAGAAAGAAGAACATTTAGCGAAATCAGCAACATCTATTGTAAGTTTAACTGTTTTTATTACAGTACTTGCAGGATT
AGCAATTTTCCCGGCGATTTTCGCATTAGGCGTTAAGCCGACTGAAGGACCAGGACTACTGTTTATCGTCCTTCCAGCAG
TATTTGCGAAAATACCATTTGGACAATTTTTCTTCATTATGTTTTTAGTTTTATTCTTCTTTGCAACATTAACATCTGCG
ATTTCCATGCTTGAAATTGTAGTAGCATCTGTTGCGAAAGATAATGAGAAAAAACGTCCGTCAGCATCATTATTAATCGG
TATTCTTATTTTTGCAGTCGGAATTCCGTCAGCATTATCGTTTGGCATTATGAGTGATGTGAAAATATTTGGGAAGACAT
TCTTTGATTTCGTCGATTTTGTGGTAAGTAATGTATTATTGCCACTCGGAGTACTAGCCATTTCGCTATTCGTACCAAAT
AAAATGAGTAAAGAAATGTTAATGAAAGAATTAGAAGTTACGGAAACGAAAGGAAAAACATTATTTAATATTTGGTTCTT
CTTGCTTCGTTATGTTATTCCAGTAACTGTAATTATTGTATTTTTAAATGCGATAGGCGTATTTAAAATGTTTGCATAA

Upstream 100 bases:

>100_bases
TTGCGTGTAGGGGACTTTTTTATTTTCTAAAGGAGGTGTGCGAGTATGAAATGAAAGTGTATAATTAACAAAAGTTTAAA
TATTCAGAAAAGGGGAATTT

Downstream 100 bases:

>100_bases
TAAAAAGACGGAGAAAGCTCCGTCTTTTTATTATGTGGTAGGTATATTTAATAAGTGATTATATGCTTTATAAGCTGTGA
TGATCGCAAGGAATAATCCG

Product: sodium-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MMKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVL
VPNSKLYPWIGRMGVITCFSVLSFYSVVGGWILLYLYYSITGSFWNGVVDYGKLFNETISNPLSAIGAQFIFMLCTIFVV
SKGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTVLYAMGQSFFSLTVGASVMVTYSSY
LKKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSA
ISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDFVDFVVSNVLLPLGVLAISLFVPN
KMSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNAIGVFKMFA

Sequences:

>Translated_452_residues
MMKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVL
VPNSKLYPWIGRMGVITCFSVLSFYSVVGGWILLYLYYSITGSFWNGVVDYGKLFNETISNPLSAIGAQFIFMLCTIFVV
SKGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTVLYAMGQSFFSLTVGASVMVTYSSY
LKKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSA
ISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDFVDFVVSNVLLPLGVLAISLFVPN
KMSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNAIGVFKMFA
>Mature_452_residues
MMKETQQWTSKIGFVLAAAGAAVGLGAIWKFPYVAGNGGGGAFFLVFLLLTLFIGMPLLLAEFVIGRSTQKEAVTAYKVL
VPNSKLYPWIGRMGVITCFSVLSFYSVVGGWILLYLYYSITGSFWNGVVDYGKLFNETISNPLSAIGAQFIFMLCTIFVV
SKGVEKGIEKASKYMMPLLFILFIAIIVRALTLDGAFAGVEFFLKPDFSKLTADTVLYAMGQSFFSLTVGASVMVTYSSY
LKKEEHLAKSATSIVSLTVFITVLAGLAIFPAIFALGVKPTEGPGLLFIVLPAVFAKIPFGQFFFIMFLVLFFFATLTSA
ISMLEIVVASVAKDNEKKRPSASLLIGILIFAVGIPSALSFGIMSDVKIFGKTFFDFVDFVVSNVLLPLGVLAISLFVPN
KMSKEMLMKELEVTETKGKTLFNIWFFLLRYVIPVTVIIVFLNAIGVFKMFA

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI171184408, Length=403, Percent_Identity=26.7990074441687, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI171184406, Length=403, Percent_Identity=26.7990074441687, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI171184404, Length=403, Percent_Identity=26.7990074441687, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI4507043, Length=379, Percent_Identity=28.7598944591029, Blast_Score=128, Evalue=9e-30,
Organism=Homo sapiens, GI21361581, Length=406, Percent_Identity=26.3546798029557, Blast_Score=125, Evalue=9e-29,
Organism=Homo sapiens, GI289191351, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI4557046, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI289191377, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI7657587, Length=380, Percent_Identity=25.7894736842105, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI4507041, Length=389, Percent_Identity=25.9640102827763, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI92859670, Length=451, Percent_Identity=23.9467849223947, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI134304856, Length=401, Percent_Identity=26.9326683291771, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI51468073, Length=296, Percent_Identity=28.7162162162162, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI188528618, Length=379, Percent_Identity=22.9551451187335, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI197276623, Length=351, Percent_Identity=25.3561253561254, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI54607094, Length=351, Percent_Identity=25.3561253561254, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI58219014, Length=300, Percent_Identity=28.3333333333333, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI33354281, Length=298, Percent_Identity=27.5167785234899, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI67782317, Length=424, Percent_Identity=24.0566037735849, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI67782313, Length=424, Percent_Identity=24.0566037735849, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI67782315, Length=424, Percent_Identity=24.0566037735849, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI194018524, Length=296, Percent_Identity=27.7027027027027, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI11181770, Length=305, Percent_Identity=26.2295081967213, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI5032097, Length=350, Percent_Identity=24.2857142857143, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21361693, Length=117, Percent_Identity=35.8974358974359, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI218563756, Length=342, Percent_Identity=24.8538011695906, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI197276625, Length=116, Percent_Identity=34.4827586206897, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI12408638, Length=275, Percent_Identity=24.3636363636364, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI289191353, Length=213, Percent_Identity=28.169014084507, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI55749589, Length=115, Percent_Identity=29.5652173913043, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25146584, Length=412, Percent_Identity=25.4854368932039, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17554804, Length=343, Percent_Identity=27.6967930029155, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI133952791, Length=435, Percent_Identity=24.5977011494253, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI71995588, Length=415, Percent_Identity=23.6144578313253, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17555248, Length=116, Percent_Identity=37.9310344827586, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115534083, Length=433, Percent_Identity=22.4018475750577, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17569475, Length=413, Percent_Identity=20.8232445520581, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17542050, Length=145, Percent_Identity=29.6551724137931, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17136952, Length=376, Percent_Identity=27.1276595744681, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI281364394, Length=379, Percent_Identity=26.9129287598945, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI28574704, Length=379, Percent_Identity=26.9129287598945, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI17136950, Length=379, Percent_Identity=26.9129287598945, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI28574702, Length=379, Percent_Identity=26.9129287598945, Blast_Score=145, Evalue=6e-35,
Organism=Drosophila melanogaster, GI24654186, Length=449, Percent_Identity=27.6169265033408, Blast_Score=131, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24762620, Length=413, Percent_Identity=27.1186440677966, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI281365034, Length=414, Percent_Identity=26.5700483091787, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI19921936, Length=403, Percent_Identity=26.5508684863524, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24652942, Length=430, Percent_Identity=25.3488372093023, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI45551088, Length=430, Percent_Identity=25.3488372093023, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24661428, Length=383, Percent_Identity=27.4151436031332, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI45550877, Length=402, Percent_Identity=23.6318407960199, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI45551183, Length=402, Percent_Identity=23.6318407960199, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24582567, Length=397, Percent_Identity=25.4408060453401, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281363702, Length=381, Percent_Identity=25.1968503937008, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24639514, Length=507, Percent_Identity=23.6686390532544, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI221329674, Length=507, Percent_Identity=24.0631163708087, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281364136, Length=400, Percent_Identity=24.75, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24639516, Length=301, Percent_Identity=27.5747508305648, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24655079, Length=297, Percent_Identity=27.6094276094276, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24639853, Length=404, Percent_Identity=23.7623762376238, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI19921352, Length=219, Percent_Identity=29.6803652968037, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24584353, Length=219, Percent_Identity=29.6803652968037, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24582569, Length=358, Percent_Identity=23.7430167597765, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 49450; Mature: 49450

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]