| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118476872
Identifier: 118476872
GI number: 118476872
Start: 1318849
End: 1319823
Strand: Direct
Name: 118476872
Synonym: BALH_1161
Alternate gene names: NA
Gene position: 1318849-1319823 (Clockwise)
Preceding gene: 118476867
Following gene: 118476873
Centisome position: 25.09
GC content: 36.31
Gene sequence:
>975_bases TTGAGAAAGTCTGTTTTTCTTCTCTGTTTTTTATTTCTATTAGTAGGGTGTCAAGGAAGTTCATATACACCGATTGCTAA AGATAAAAGTGTTATTATAACAACGAATATAAAAGAAGGAAGTATTAGTTTTGTTGATAAACAAACTAAAAAGTTAATTA CGACATGGGAACTTAACGAGCCGATGGCAGGAACCCTACTACTTCCAAATGGTGAAGACATACTTGTATATGGTAAGCAG TTAGAGTACATGTATGTATATTCACTAGTCGAAGGAAGACAAGTGGAGAAATATAAAACTGGAAAAGGTATTGTAAATGT AATCGTATCCGAAGATAAAAAACAATTATTTGCTGCTGATCAAACTGCTCAAAAGGTAAGGTTCTTTACGATTAATGGAA AAGAGACAGGGAATGTTTCGACAGGAAAAGGACCGATAACGATGGTAGAGTACGATAACCAGTTATCTGTATTAAACTTT TATGATACGAAGCTAACGACAATTGATACAAAGAAAAAAGAAGTGATACAATCTTTTATGATTCCCCCAGCGTCAACGGG AGCAACAATTAGTCCAGATGGGAAAGAAATATGGATTGGCGGACATGGTGATGGAAATCAGGTGAATGAGAAAGTATTAG TGTATTCTTTGCAGAGCGGAGAAATGGTACGTTCTTTACACGCTCCGTTTATGCCTGTGAATATTACGAAGGATTATAAG TACGTATATGCATTAAGTCATGGTTCGAATACGCTTAGAAAGTTTGATGTTAGCACGTATAAAGAGGTGGCTGCTGTAGA AGTAGGATCGAACCCATTTGCATTTTTGAAGAGCGGAGCAGAAGGATACGTAGCAAGCTATGACAGTGATGAGGTGTGTG TCATAGATATGAAGAATTTGAAAATAAAACAAACAATTAAAGTCGGAAAAGGACCGTTTCAACTCATAGAGAGAGAAGGG AAGGACAATGAGTAA
Upstream 100 bases:
>100_bases TATATGTAAATGAAGTAGGAAAGGGAAATTTCACACTTTCCACACATTTATTTGTTATTTTACAATTATAACGAAATCAT CCGAAGATGGAGGGAATCTT
Downstream 100 bases:
>100_bases ATATAGGGTGCTAGTTGTAGATGATGAAAGTGATATGAGGCAACTTGTTGGAATGTACTTAGATAATTTCGGATACGAGT GGGGAGAAGCTGAAAATGGA
Product: lipoprotein
Products: NA
Alternate protein names: Surface Antigen; Surface Antigen Lipoprotein
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRKSVFLLCFLFLLVGCQGSSYTPIAKDKSVIITTNIKEGSISFVDKQTKKLITTWELNEPMAGTLLLPNGEDILVYGKQ LEYMYVYSLVEGRQVEKYKTGKGIVNVIVSEDKKQLFAADQTAQKVRFFTINGKETGNVSTGKGPITMVEYDNQLSVLNF YDTKLTTIDTKKKEVIQSFMIPPASTGATISPDGKEIWIGGHGDGNQVNEKVLVYSLQSGEMVRSLHAPFMPVNITKDYK YVYALSHGSNTLRKFDVSTYKEVAAVEVGSNPFAFLKSGAEGYVASYDSDEVCVIDMKNLKIKQTIKVGKGPFQLIEREG KDNE
Sequences:
>Translated_324_residues MRKSVFLLCFLFLLVGCQGSSYTPIAKDKSVIITTNIKEGSISFVDKQTKKLITTWELNEPMAGTLLLPNGEDILVYGKQ LEYMYVYSLVEGRQVEKYKTGKGIVNVIVSEDKKQLFAADQTAQKVRFFTINGKETGNVSTGKGPITMVEYDNQLSVLNF YDTKLTTIDTKKKEVIQSFMIPPASTGATISPDGKEIWIGGHGDGNQVNEKVLVYSLQSGEMVRSLHAPFMPVNITKDYK YVYALSHGSNTLRKFDVSTYKEVAAVEVGSNPFAFLKSGAEGYVASYDSDEVCVIDMKNLKIKQTIKVGKGPFQLIEREG KDNE >Mature_324_residues MRKSVFLLCFLFLLVGCQGSSYTPIAKDKSVIITTNIKEGSISFVDKQTKKLITTWELNEPMAGTLLLPNGEDILVYGKQ LEYMYVYSLVEGRQVEKYKTGKGIVNVIVSEDKKQLFAADQTAQKVRFFTINGKETGNVSTGKGPITMVEYDNQLSVLNF YDTKLTTIDTKKKEVIQSFMIPPASTGATISPDGKEIWIGGHGDGNQVNEKVLVYSLQSGEMVRSLHAPFMPVNITKDYK YVYALSHGSNTLRKFDVSTYKEVAAVEVGSNPFAFLKSGAEGYVASYDSDEVCVIDMKNLKIKQTIKVGKGPFQLIEREG KDNE
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35991; Mature: 35991
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSVFLLCFLFLLVGCQGSSYTPIAKDKSVIITTNIKEGSISFVDKQTKKLITTWELNE CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHEEEEEEECCC PMAGTLLLPNGEDILVYGKQLEYMYVYSLVEGRQVEKYKTGKGIVNVIVSEDKKQLFAAD CCCCEEECCCCCEEEEECCCCCEEEEEEHHCCCEEEEEECCCCEEEEEEECCCHHHHHCC QTAQKVRFFTINGKETGNVSTGKGPITMVEYDNQLSVLNFYDTKLTTIDTKKKEVIQSFM CCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEECCHHHHHHHHHC IPPASTGATISPDGKEIWIGGHGDGNQVNEKVLVYSLQSGEMVRSLHAPFMPVNITKDYK CCCCCCCCEECCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCEEEEEECCEE YVYALSHGSNTLRKFDVSTYKEVAAVEVGSNPFAFLKSGAEGYVASYDSDEVCVIDMKNL EEEEEECCCCCEEEECCHHHHEEEEEEECCCCHHEEECCCCCEEEECCCCCEEEEEECCC KIKQTIKVGKGPFQLIEREGKDNE EEEEEEECCCCHHHHHHCCCCCCC >Mature Secondary Structure MRKSVFLLCFLFLLVGCQGSSYTPIAKDKSVIITTNIKEGSISFVDKQTKKLITTWELNE CCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHEEEEEEECCC PMAGTLLLPNGEDILVYGKQLEYMYVYSLVEGRQVEKYKTGKGIVNVIVSEDKKQLFAAD CCCCEEECCCCCEEEEECCCCCEEEEEEHHCCCEEEEEECCCCEEEEEEECCCHHHHHCC QTAQKVRFFTINGKETGNVSTGKGPITMVEYDNQLSVLNFYDTKLTTIDTKKKEVIQSFM CCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEECCHHHHHHHHHC IPPASTGATISPDGKEIWIGGHGDGNQVNEKVLVYSLQSGEMVRSLHAPFMPVNITKDYK CCCCCCCCEECCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCEEEEEECCEE YVYALSHGSNTLRKFDVSTYKEVAAVEVGSNPFAFLKSGAEGYVASYDSDEVCVIDMKNL EEEEEECCCCCEEEECCHHHHEEEEEEECCCCHHEEECCCCCEEEECCCCCEEEEEECCC KIKQTIKVGKGPFQLIEREGKDNE EEEEEEECCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA