| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ydfJ [H]
Identifier: 118476864
GI number: 118476864
Start: 1308980
End: 1311172
Strand: Direct
Name: ydfJ [H]
Synonym: BALH_1152
Alternate gene names: 118476864
Gene position: 1308980-1311172 (Clockwise)
Preceding gene: 118476863
Following gene: 118476865
Centisome position: 24.9
GC content: 35.84
Gene sequence:
>2193_bases GTGAAGACAAATGTACATAAAGTTGATAAATGGGGGAAGTTAGGAGCTTTTTTGTATCAGTTTCGTTATACAGTAATTGT AGCATTACTATTGGTTGCGATAGCGCTCGGTATTTTCGCTCCAAAGCTACCGGGAGTATTAGGTGGTGATGGCTTTCAAA CGGAAGGGGACTATCAAAAAACGAAAGAAATTTTAGATAAAGATTTTAAGAGGTCTCAAGATACACTTCTACTCGTTTTT GAAAAAAATAAAGGTGTTTCACACGAGGAATTTCAGAAGAAAGTGGAGACAATTGTAAAAAATGTACAAGAGAAAGAGAC ATATGAATCTTTCCATCACCCAGTGCAAAATAAAGAAATGTTACAAGATGATATCGGCTATGCGACAATTTTATTTTCCG GGAAAACAAATAAGGAACGAATGGAAAAGACATTACAATTTGCTGATAAAATCGAAAAGGAAAGTAATGCAACATTAAAA GTAACGCCTACAGGATTTCCGAAAATTAACAAAGAGATTAATGAAAGAACGCAAAATGATTTAAAAGTAGCAGAGATGAT TGGCTTACCGATTGCATTCCTCGTATTACTATTTTCATTTGGTAGCCTTTTGGCATCAATTTTACCAATTGTAAATGGGG CACTTAGTGTTATTAGTACGATGGGCATATTATATTTTATAGGTAGCGATAAGGAGCTATCTATCTTTGTGTTAAATGTT GCACCAATGATCGGACTTGCGCTATCTATTGATTTTGCGCTATTATTTGTAAATCGCTTTCGAGAGGAAGTTGCAAAGCG AACGGTAAAAGAAGCGATAGCAATTACATATCAGACAGCAGGGCGGGCAATCGTATTTTCAGGATTATGTGTATTCGTTG GCTTATCCGGTTTGTTTTTCTTTAAGATCGATTATATTCAGTCTGTCGCAATTAGCGGAATGATTGTTGTGATTATGAGT ATTGTATTCTCGCTCACACTTCTTCCAGCGCTATTATCGTTAATCGGTAAACGAATATTAAAAAAGAATCAAGTAGCACA TACGCCGGCAAAGGCGTGGCGTACATTTGCACAATTTGTCATGAAACATCCAATCGCGATGATTATTGTTGTTACAACAT TTATTGTGATTTGCTTATTGCCATTACGTACAGCTAATTTGCAGTTCCCTGACGTGGAAGCTCTACCTAAACAAAGTGAT ACAAGAATTGCATATGAGAAGTACGAAGAGGCATTTAATGAAACTGCAAAAACACATGCTGATGTTACGTTAGTCGTAGA GACGAAAAAAGATATGAAAGAAACAGAAAGTTTACAAAAGGTAGAAGAAGTCGTTCAAAAGTTAAAAGATGATAAGAAAG TATATGAAGTAAGAAGTTTATACGACAGTTTAAATGGAATGAAATCAGAGCAAGTGGCGGGGATGTTACAGTCGCCAGAA GCTGCTAAAATAGCTCCGGTATTTGAATCGTATACGAAAGGAAATAAGACAACAATCGAAGTCTTTTTAGATACAAAACC ACGTACAGAAATTGCGAAACAGTGGGTGCGTGATTTTAAACAAAATTATAAAGAAACGAACGTTACGTATTATCTAGGCG GCATGACGATGTTCCAACAAGAGTTGGAAGATGAAATTAAAGATAAAGTTGCAATTGGTATGTCTGTTATATTTGGATCG ACCTTCGTTATATTATTATTTGCATTCCGATCTATACTCATTCCGATTAAGGCGATTATTATGAATGTACTTAGTTTAAG CGCAACAATTGGAATTGTTGTTTGGTTATTTGAAGGTGGTCATTTTGGTTTAGAAGCAAGTCCTGTTTTATTTGTCTTAC CAATCTTCATTTTCGGCCTCGTATTTGGGCTTAGCATGGATTATGAAGTCTTTCTTATTTCGCGTATTCATGAACTGTAT GAAGAAACAGGAGATAATGATCAAGCGACGTTAGAAGGACTTGTGTCAACAAGTAGAATTATTACGTCTGCCGCTTTAAT TATGATTGTTGTAACTGGTGCGTTTGCTTTTACTGATATTTTACCAGTACGACAAATGGGGCTTGGCGTTGCATTAGCGA TATTCCTTGATGCAACAATTATTCGTCTTATGCTCGTACCAAGTTTAATGAAATTGTTTGGAGACTGGAACTGGTGGTTA CCATTTCGAAAGAAAAGAGAAAAATCATCATAA
Upstream 100 bases:
>100_bases AGAAAAACTATTATTATAGTTTTTCTAGACGTTTTTTGTTTGCAGGAAGATGTGATACAGTATAAGTGATAATTGAATGA TGTAAAGTAGGTGAAAATGT
Downstream 100 bases:
>100_bases AAAATACTCATCTATAAGATGAGTATTTTTTATGAATAGCAAGACCTACATTTTGCAAATAGTATGTGATAAGAACATTA CATATAAGTAGGTGAAGGCA
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 730; Mature: 730
Protein sequence:
>730_residues MKTNVHKVDKWGKLGAFLYQFRYTVIVALLLVAIALGIFAPKLPGVLGGDGFQTEGDYQKTKEILDKDFKRSQDTLLLVF EKNKGVSHEEFQKKVETIVKNVQEKETYESFHHPVQNKEMLQDDIGYATILFSGKTNKERMEKTLQFADKIEKESNATLK VTPTGFPKINKEINERTQNDLKVAEMIGLPIAFLVLLFSFGSLLASILPIVNGALSVISTMGILYFIGSDKELSIFVLNV APMIGLALSIDFALLFVNRFREEVAKRTVKEAIAITYQTAGRAIVFSGLCVFVGLSGLFFFKIDYIQSVAISGMIVVIMS IVFSLTLLPALLSLIGKRILKKNQVAHTPAKAWRTFAQFVMKHPIAMIIVVTTFIVICLLPLRTANLQFPDVEALPKQSD TRIAYEKYEEAFNETAKTHADVTLVVETKKDMKETESLQKVEEVVQKLKDDKKVYEVRSLYDSLNGMKSEQVAGMLQSPE AAKIAPVFESYTKGNKTTIEVFLDTKPRTEIAKQWVRDFKQNYKETNVTYYLGGMTMFQQELEDEIKDKVAIGMSVIFGS TFVILLFAFRSILIPIKAIIMNVLSLSATIGIVVWLFEGGHFGLEASPVLFVLPIFIFGLVFGLSMDYEVFLISRIHELY EETGDNDQATLEGLVSTSRIITSAALIMIVVTGAFAFTDILPVRQMGLGVALAIFLDATIIRLMLVPSLMKLFGDWNWWL PFRKKREKSS
Sequences:
>Translated_730_residues MKTNVHKVDKWGKLGAFLYQFRYTVIVALLLVAIALGIFAPKLPGVLGGDGFQTEGDYQKTKEILDKDFKRSQDTLLLVF EKNKGVSHEEFQKKVETIVKNVQEKETYESFHHPVQNKEMLQDDIGYATILFSGKTNKERMEKTLQFADKIEKESNATLK VTPTGFPKINKEINERTQNDLKVAEMIGLPIAFLVLLFSFGSLLASILPIVNGALSVISTMGILYFIGSDKELSIFVLNV APMIGLALSIDFALLFVNRFREEVAKRTVKEAIAITYQTAGRAIVFSGLCVFVGLSGLFFFKIDYIQSVAISGMIVVIMS IVFSLTLLPALLSLIGKRILKKNQVAHTPAKAWRTFAQFVMKHPIAMIIVVTTFIVICLLPLRTANLQFPDVEALPKQSD TRIAYEKYEEAFNETAKTHADVTLVVETKKDMKETESLQKVEEVVQKLKDDKKVYEVRSLYDSLNGMKSEQVAGMLQSPE AAKIAPVFESYTKGNKTTIEVFLDTKPRTEIAKQWVRDFKQNYKETNVTYYLGGMTMFQQELEDEIKDKVAIGMSVIFGS TFVILLFAFRSILIPIKAIIMNVLSLSATIGIVVWLFEGGHFGLEASPVLFVLPIFIFGLVFGLSMDYEVFLISRIHELY EETGDNDQATLEGLVSTSRIITSAALIMIVVTGAFAFTDILPVRQMGLGVALAIFLDATIIRLMLVPSLMKLFGDWNWWL PFRKKREKSS >Mature_730_residues MKTNVHKVDKWGKLGAFLYQFRYTVIVALLLVAIALGIFAPKLPGVLGGDGFQTEGDYQKTKEILDKDFKRSQDTLLLVF EKNKGVSHEEFQKKVETIVKNVQEKETYESFHHPVQNKEMLQDDIGYATILFSGKTNKERMEKTLQFADKIEKESNATLK VTPTGFPKINKEINERTQNDLKVAEMIGLPIAFLVLLFSFGSLLASILPIVNGALSVISTMGILYFIGSDKELSIFVLNV APMIGLALSIDFALLFVNRFREEVAKRTVKEAIAITYQTAGRAIVFSGLCVFVGLSGLFFFKIDYIQSVAISGMIVVIMS IVFSLTLLPALLSLIGKRILKKNQVAHTPAKAWRTFAQFVMKHPIAMIIVVTTFIVICLLPLRTANLQFPDVEALPKQSD TRIAYEKYEEAFNETAKTHADVTLVVETKKDMKETESLQKVEEVVQKLKDDKKVYEVRSLYDSLNGMKSEQVAGMLQSPE AAKIAPVFESYTKGNKTTIEVFLDTKPRTEIAKQWVRDFKQNYKETNVTYYLGGMTMFQQELEDEIKDKVAIGMSVIFGS TFVILLFAFRSILIPIKAIIMNVLSLSATIGIVVWLFEGGHFGLEASPVLFVLPIFIFGLVFGLSMDYEVFLISRIHELY EETGDNDQATLEGLVSTSRIITSAALIMIVVTGAFAFTDILPVRQMGLGVALAIFLDATIIRLMLVPSLMKLFGDWNWWL PFRKKREKSS
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 81966; Mature: 81966
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNVHKVDKWGKLGAFLYQFRYTVIVALLLVAIALGIFAPKLPGVLGGDGFQTEGDYQK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH TKEILDKDFKRSQDTLLLVFEKNKGVSHEEFQKKVETIVKNVQEKETYESFHHPVQNKEM HHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LQDDIGYATILFSGKTNKERMEKTLQFADKIEKESNATLKVTPTGFPKINKEINERTQND HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH LKVAEMIGLPIAFLVLLFSFGSLLASILPIVNGALSVISTMGILYFIGSDKELSIFVLNV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEH APMIGLALSIDFALLFVNRFREEVAKRTVKEAIAITYQTAGRAIVFSGLCVFVGLSGLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FKIDYIQSVAISGMIVVIMSIVFSLTLLPALLSLIGKRILKKNQVAHTPAKAWRTFAQFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MKHPIAMIIVVTTFIVICLLPLRTANLQFPDVEALPKQSDTRIAYEKYEEAFNETAKTHA HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC DVTLVVETKKDMKETESLQKVEEVVQKLKDDKKVYEVRSLYDSLNGMKSEQVAGMLQSPE CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC AAKIAPVFESYTKGNKTTIEVFLDTKPRTEIAKQWVRDFKQNYKETNVTYYLGGMTMFQQ CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH ELEDEIKDKVAIGMSVIFGSTFVILLFAFRSILIPIKAIIMNVLSLSATIGIVVWLFEGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC HFGLEASPVLFVLPIFIFGLVFGLSMDYEVFLISRIHELYEETGDNDQATLEGLVSTSRI CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ITSAALIMIVVTGAFAFTDILPVRQMGLGVALAIFLDATIIRLMLVPSLMKLFGDWNWWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PFRKKREKSS CCHHHCCCCC >Mature Secondary Structure MKTNVHKVDKWGKLGAFLYQFRYTVIVALLLVAIALGIFAPKLPGVLGGDGFQTEGDYQK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH TKEILDKDFKRSQDTLLLVFEKNKGVSHEEFQKKVETIVKNVQEKETYESFHHPVQNKEM HHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LQDDIGYATILFSGKTNKERMEKTLQFADKIEKESNATLKVTPTGFPKINKEINERTQND HHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH LKVAEMIGLPIAFLVLLFSFGSLLASILPIVNGALSVISTMGILYFIGSDKELSIFVLNV HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEH APMIGLALSIDFALLFVNRFREEVAKRTVKEAIAITYQTAGRAIVFSGLCVFVGLSGLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH FKIDYIQSVAISGMIVVIMSIVFSLTLLPALLSLIGKRILKKNQVAHTPAKAWRTFAQFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MKHPIAMIIVVTTFIVICLLPLRTANLQFPDVEALPKQSDTRIAYEKYEEAFNETAKTHA HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC DVTLVVETKKDMKETESLQKVEEVVQKLKDDKKVYEVRSLYDSLNGMKSEQVAGMLQSPE CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC AAKIAPVFESYTKGNKTTIEVFLDTKPRTEIAKQWVRDFKQNYKETNVTYYLGGMTMFQQ CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHH ELEDEIKDKVAIGMSVIFGSTFVILLFAFRSILIPIKAIIMNVLSLSATIGIVVWLFEGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC HFGLEASPVLFVLPIFIFGLVFGLSMDYEVFLISRIHELYEETGDNDQATLEGLVSTSRI CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ITSAALIMIVVTGAFAFTDILPVRQMGLGVALAIFLDATIIRLMLVPSLMKLFGDWNWWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PFRKKREKSS CCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]