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The map label for this gene is oppA [H]

Identifier: 118476766

GI number: 118476766

Start: 1200373

End: 1202064

Strand: Direct

Name: oppA [H]

Synonym: BALH_1048

Alternate gene names: 118476766

Gene position: 1200373-1202064 (Clockwise)

Preceding gene: 118476764

Following gene: 118476767

Centisome position: 22.83

GC content: 35.52

Gene sequence:

>1692_bases
TTGTTTGAAAATGAAAGGGCTAACATTTTTGTGGAGGGTGGAAGTATGAAAAAAAAGATTCCAGTTTTTGTAGTATCAAC
AGTAGCAATGAGCATGATGTTAGGGGCATGTAGCTACCAAAAAGATGAGCCGCAAGCGAACGCAAAAGGGGATAGCGGGA
AAAGCGGTGCAAAGCAAGTCATTAATTTAATTGAAACGCAAGAAATTCCAACGATGGATCCAGCGTTATCAGCTGATGCG
GTTTCTTCAAGAGTAATGACTAATACGATGGAAGGCTTATACAGTTTAGGAAAAGATGATAAGCTAGTTCCTGGTGTAGC
GAAGGAATTTAAAAAGTCAGAAGACGGTAAAAAATATACATTTACATTACGTGAAGACGCAAAATGGTCAAATGGTGAGC
CTGTAACGGCGAAAGATTTCGTATATGCATGGCAAAGAGCAATTAATCCAGATACAGCTGCGAAATCAGCGTACATTATG
TATGATATAAAAAATGCAGAAAAAATTAATAAAAAAGAGATGAGTCCGGATCAATTAGGTGTAAAAGCGATTGATGATCA
TACATTAGAAGTGGAATTAGATAATTCCATTCCATACCTTGTAGATTTAATGGTATATCCAATCTTCTATCCTGTGAATG
AAAAGTTCGTGAAAGAGCAAGGTACGAAGTTTGGTTTGGAAGCGAATACAACGCTTTATAACGGACCATTTACATTAAGT
GATTGGCAACATGAACGTAGCTTTAAAATGACAAAGAGCCCGTCATATTGGGACAATAAAGAAGTGAAGATTGAGGAAGT
AAACTTTAATATTGTTAAAGATACGTCTACACCAATTAATTTATATGAAACAAACGCAGTCGATCGAGCGACGTTATTAG
CGGAGTTCATCGATAAATATAAAGGAAAACCAGATTTCCAAACAGTAGAAGATACATCTGTATTCTTCCTTCGTTTAAAT
CAAAAAGATCCAGCTTTAGCAAATAAAAATATTCGTAAAGCAATTTCACTTGCTTTTGAACGTAAGCCGTTCGTTGATAC
ATTATTAAATAACGGTTCTAAGCCAGCAACAGGATTAATTCCTGATAACTTCATTAAAGGACCGGATAAAAAAGACTTCC
GTGCTGTAAATGGAGATATTGTAAAACCAAACGTGAAAGAAGCGAAGAAATATTGGGAAGCTGGTAAAAAAGAGCTTGGT
AAAAATGAAATCGAATTAGAGTTATTAAATGAAGACGTTGAATTATCGAAGAAAACGGGTGAATATTTAAAAGGTGAGTT
AGAAAAGAATTTACCAGGTTTAACAGTGAAAATTAAACAACAACCATTCGCACAAAAACTAAAATTAGAAGATGCGGGCG
ATTTTGTCATGTCATTCTCTGGATGGAGTGCGGACTTCCCAGATCCAATTACATATCTTGATATGTTTGTGACGGACGGA
TCACAAAATAAAATGAAATATTCTAATCCGAAATATGATGAAATTATCATGAAAGCGAAAAAAGATGGAAGCGATGTAAG
TGCTCGTTGGAAAAGCTTACTAGAAGCAGAGAAAATGTTACTTGATGACGCTGCGATTGTTCCAGTATATCAACGTGGTA
GAGCATACTTGCAAAGAGATTCAATTAAAAATATGTACAACCATAAATATGGCGGCGATTTAAGCTTTAAATGGGCGTCA
GTAGAGAAATAA

Upstream 100 bases:

>100_bases
TAAATTGTAACAGAAAATTTTAATAAAATAGGAATATAAATATACAAAAAATATATTTGTGTGTATAATATGAATTGTTA
GAACATATATATATTTCTTT

Downstream 100 bases:

>100_bases
GAAAAAAGCAGGTGATTACCTGCTTTTTTTAATACGTACGTTTCTTATAAATACCTTTCCCGCCGACCTCGTTCCAGCCG
GATTGGACATCCAAACTTTT

Product: oligopeptide transporter, periplasmic-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MFENERANIFVEGGSMKKKIPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPALSADA
VSSRVMTNTMEGLYSLGKDDKLVPGVAKEFKKSEDGKKYTFTLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIM
YDIKNAEKINKKEMSPDQLGVKAIDDHTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLS
DWQHERSFKMTKSPSYWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVFFLRLN
QKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELG
KNEIELELLNEDVELSKKTGEYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDFVMSFSGWSADFPDPITYLDMFVTDG
SQNKMKYSNPKYDEIIMKAKKDGSDVSARWKSLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLSFKWAS
VEK

Sequences:

>Translated_563_residues
MFENERANIFVEGGSMKKKIPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPALSADA
VSSRVMTNTMEGLYSLGKDDKLVPGVAKEFKKSEDGKKYTFTLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIM
YDIKNAEKINKKEMSPDQLGVKAIDDHTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLS
DWQHERSFKMTKSPSYWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVFFLRLN
QKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELG
KNEIELELLNEDVELSKKTGEYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDFVMSFSGWSADFPDPITYLDMFVTDG
SQNKMKYSNPKYDEIIMKAKKDGSDVSARWKSLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLSFKWAS
VEK
>Mature_563_residues
MFENERANIFVEGGSMKKKIPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQVINLIETQEIPTMDPALSADA
VSSRVMTNTMEGLYSLGKDDKLVPGVAKEFKKSEDGKKYTFTLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIM
YDIKNAEKINKKEMSPDQLGVKAIDDHTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLS
DWQHERSFKMTKSPSYWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKYKGKPDFQTVEDTSVFFLRLN
QKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLIPDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELG
KNEIELELLNEDVELSKKTGEYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDFVMSFSGWSADFPDPITYLDMFVTDG
SQNKMKYSNPKYDEIIMKAKKDGSDVSARWKSLLEAEKMLLDDAAIVPVYQRGRAYLQRDSIKNMYNHKYGGDLSFKWAS
VEK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=539, Percent_Identity=29.8701298701299, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI87081878, Length=537, Percent_Identity=27.3743016759777, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789397, Length=508, Percent_Identity=26.9685039370079, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1787762, Length=481, Percent_Identity=23.9085239085239, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787052, Length=322, Percent_Identity=24.223602484472, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1789887, Length=401, Percent_Identity=24.9376558603491, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1789966, Length=445, Percent_Identity=22.247191011236, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63633; Mature: 63633

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFENERANIFVEGGSMKKKIPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQV
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
INLIETQEIPTMDPALSADAVSSRVMTNTMEGLYSLGKDDKLVPGVAKEFKKSEDGKKYT
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEE
FTLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMSPDQLG
EEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHCC
VKAIDDHTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLS
CEEECCCEEEEEECCCCHHHHHHHHHHHEECCCHHHHHHCCCEECCCCCCEEECCCEECC
DWQHERSFKMTKSPSYWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKY
CCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH
KGKPDFQTVEDTSVFFLRLNQKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLI
CCCCCCCCCCCCEEEEEEECCCCCCHHCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
PDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVELSKKTG
CCHHCCCCCCCCCEECCCCEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
EYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDFVMSFSGWSADFPDPITYLDMFVTDG
HHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCCHHEEEEEEECC
SQNKMKYSNPKYDEIIMKAKKDGSDVSARWKSLLEAEKMLLDDAAIVPVYQRGRAYLQRD
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
SIKNMYNHKYGGDLSFKWASVEK
HHHHHHCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MFENERANIFVEGGSMKKKIPVFVVSTVAMSMMLGACSYQKDEPQANAKGDSGKSGAKQV
CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
INLIETQEIPTMDPALSADAVSSRVMTNTMEGLYSLGKDDKLVPGVAKEFKKSEDGKKYT
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEE
FTLREDAKWSNGEPVTAKDFVYAWQRAINPDTAAKSAYIMYDIKNAEKINKKEMSPDQLG
EEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCCHHHCC
VKAIDDHTLEVELDNSIPYLVDLMVYPIFYPVNEKFVKEQGTKFGLEANTTLYNGPFTLS
CEEECCCEEEEEECCCCHHHHHHHHHHHEECCCHHHHHHCCCEECCCCCCEEECCCEECC
DWQHERSFKMTKSPSYWDNKEVKIEEVNFNIVKDTSTPINLYETNAVDRATLLAEFIDKY
CCCCCCCEEECCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH
KGKPDFQTVEDTSVFFLRLNQKDPALANKNIRKAISLAFERKPFVDTLLNNGSKPATGLI
CCCCCCCCCCCCEEEEEEECCCCCCHHCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
PDNFIKGPDKKDFRAVNGDIVKPNVKEAKKYWEAGKKELGKNEIELELLNEDVELSKKTG
CCHHCCCCCCCCCEECCCCEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
EYLKGELEKNLPGLTVKIKQQPFAQKLKLEDAGDFVMSFSGWSADFPDPITYLDMFVTDG
HHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCCCHHEEEEEEECC
SQNKMKYSNPKYDEIIMKAKKDGSDVSARWKSLLEAEKMLLDDAAIVPVYQRGRAYLQRD
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHH
SIKNMYNHKYGGDLSFKWASVEK
HHHHHHCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]