| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118476742
Identifier: 118476742
GI number: 118476742
Start: 1173077
End: 1173961
Strand: Direct
Name: 118476742
Synonym: BALH_1022
Alternate gene names: NA
Gene position: 1173077-1173961 (Clockwise)
Preceding gene: 118476741
Following gene: 118476744
Centisome position: 22.31
GC content: 23.62
Gene sequence:
>885_bases ATGGAATTTTACGATTTGGGTATTACCATTAAAGAACTTAGAATTAAAAAAAATATATCACAATCTGAATTATGTCATGG AATATGTTCACAAAGTCAAATTAGCAAGATTGAAAAAGGTGTGATTTATCCATCTAGCATATTGTTATATCAATTATCAG AAAGGCTTGGTATTGATCCAAATAATATATTTGCACTAACTCAAAACAAAAAATTAAAATATATAGAAAATGTAAAATGC GTAATGAAAGACTGCATAAGACAACATCAATATAAAGAGCTTTATGAAATAGTAACAAAAGAAAAAAACTTAAATAATTT TCGAATGAAAGAAGATAAACAATTTCTAATATGGCATGAAGCAATTGCTATATATCGTGTGAATAACTCAATAAAAACAG CTTTAACTCTTTTGAATAATGCATTAAAAATAACTGTAACGAATATTGATTTTTTAACAGAGAGAGAAATAGATATTATG CAGACAATGGCTATATTTCATGCAGAAAATAAAGAATATAAAGAGAGTATTAATATATTAAAAAGATGTTTAAATAATTT TGATAAGTTAGATTTTCCTAGAGATAAAGAAATTAAATTGAAAATCATTTATAATTTAGCAAAATGTTTGAATTACACAT ATCAATATGAAGAAGCAAAAAAATACATTGATAAGGGTATCAAATTAGCTATTAATCTAAATACTTTATACTTATTGGGT GAACTATACTATGAAAAAGGTTCGAATTTACTAAAGCTTGAACAATCTAATAAAGAAGAAGTTGCTGATAACATGAAAAC AGCGTTATTTATATTTGAATTAACAAAAAACGAAAAAAAATTACAAATAATTAAAGAAGGATATTTCGAAAAACATAATT GCTAA
Upstream 100 bases:
>100_bases ATATAGAAGAAACAATAATTGCAACTGTACTAATTTTACATTACATTAAAAGATGAAAAATAATTTTATACTCATTAAGG GTTATATTTGAGGAGAGAAA
Downstream 100 bases:
>100_bases ATAACTACTTATAGTACAATAAAACCTACAGGAAAAGTTCCTGTAGGTTTTACACTTATAAACCTCTTACTATTTTTTAT AAACTTGATTCTAAAATATT
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; Transcriptional Regulator PlcR; Helix-Turn-Helix Domain-Containing Protein; Xre Family Transcriptional Regulator; Transcriptional Activator; Site-Specific Tyrosine Recombinase XerS; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MEFYDLGITIKELRIKKNISQSELCHGICSQSQISKIEKGVIYPSSILLYQLSERLGIDPNNIFALTQNKKLKYIENVKC VMKDCIRQHQYKELYEIVTKEKNLNNFRMKEDKQFLIWHEAIAIYRVNNSIKTALTLLNNALKITVTNIDFLTEREIDIM QTMAIFHAENKEYKESINILKRCLNNFDKLDFPRDKEIKLKIIYNLAKCLNYTYQYEEAKKYIDKGIKLAINLNTLYLLG ELYYEKGSNLLKLEQSNKEEVADNMKTALFIFELTKNEKKLQIIKEGYFEKHNC
Sequences:
>Translated_294_residues MEFYDLGITIKELRIKKNISQSELCHGICSQSQISKIEKGVIYPSSILLYQLSERLGIDPNNIFALTQNKKLKYIENVKC VMKDCIRQHQYKELYEIVTKEKNLNNFRMKEDKQFLIWHEAIAIYRVNNSIKTALTLLNNALKITVTNIDFLTEREIDIM QTMAIFHAENKEYKESINILKRCLNNFDKLDFPRDKEIKLKIIYNLAKCLNYTYQYEEAKKYIDKGIKLAINLNTLYLLG ELYYEKGSNLLKLEQSNKEEVADNMKTALFIFELTKNEKKLQIIKEGYFEKHNC >Mature_294_residues MEFYDLGITIKELRIKKNISQSELCHGICSQSQISKIEKGVIYPSSILLYQLSERLGIDPNNIFALTQNKKLKYIENVKC VMKDCIRQHQYKELYEIVTKEKNLNNFRMKEDKQFLIWHEAIAIYRVNNSIKTALTLLNNALKITVTNIDFLTEREIDIM QTMAIFHAENKEYKESINILKRCLNNFDKLDFPRDKEIKLKIIYNLAKCLNYTYQYEEAKKYIDKGIKLAINLNTLYLLG ELYYEKGSNLLKLEQSNKEEVADNMKTALFIFELTKNEKKLQIIKEGYFEKHNC
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34760; Mature: 34760
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYDLGITIKELRIKKNISQSELCHGICSQSQISKIEKGVIYPSSILLYQLSERLGIDP CCEEECCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC NNIFALTQNKKLKYIENVKCVMKDCIRQHQYKELYEIVTKEKNLNNFRMKEDKQFLIWHE CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE AIAIYRVNNSIKTALTLLNNALKITVTNIDFLTEREIDIMQTMAIFHAENKEYKESINIL EEEEEEECCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH KRCLNNFDKLDFPRDKEIKLKIIYNLAKCLNYTYQYEEAKKYIDKGIKLAINLNTLYLLG HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHH ELYYEKGSNLLKLEQSNKEEVADNMKTALFIFELTKNEKKLQIIKEGYFEKHNC HHHHHCCCCEEEECCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MEFYDLGITIKELRIKKNISQSELCHGICSQSQISKIEKGVIYPSSILLYQLSERLGIDP CCEEECCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC NNIFALTQNKKLKYIENVKCVMKDCIRQHQYKELYEIVTKEKNLNNFRMKEDKQFLIWHE CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE AIAIYRVNNSIKTALTLLNNALKITVTNIDFLTEREIDIMQTMAIFHAENKEYKESINIL EEEEEEECCHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH KRCLNNFDKLDFPRDKEIKLKIIYNLAKCLNYTYQYEEAKKYIDKGIKLAINLNTLYLLG HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHH ELYYEKGSNLLKLEQSNKEEVADNMKTALFIFELTKNEKKLQIIKEGYFEKHNC HHHHHCCCCEEEECCCCHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA