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The map label for this gene is rapF [H]

Identifier: 118476636

GI number: 118476636

Start: 1043675

End: 1044820

Strand: Direct

Name: rapF [H]

Synonym: BALH_0912

Alternate gene names: 118476636

Gene position: 1043675-1044820 (Clockwise)

Preceding gene: 118476635

Following gene: 118476637

Centisome position: 19.85

GC content: 31.15

Gene sequence:

>1146_bases
TTGTATAAATATCCTAATTTTGTAAGTTCGAAGAGAAGGGGATGCGAGTGTATGGGAGCAGATGTAGTAACAAGGGAGCA
AATGAAACATTCTTTAGATGATTGGTATCGTGTAATGTTGCAGCAAAATATAGAGAAAGCAACGGAGATGAAGGAAGATA
TTGAGAGTGGATTTTCTAATGTAAAAGAGGATGGGGATTTATGGCTATATTACTCTTTATTAGATTTTAGATATAAAGTG
CTGGCGGATGGCTTACAAATTACTAAAAATAGTTTTGATAAAATTGATGAAATTTATAAAACGTCTGAAAATCGTTTGTC
ATATTACTATTATTTTTTTAAGGCAATGCATGCAACTCTAATATCAAATTACAATGATGCAAGTAGATGTTATGAGAAGG
CCAAAGCACTAATAAAATATATTCCTGATGAATTAGAATATGGGGAATTCTGTTATCGTCTTTCTGCATTTTTCTACAAT
ACAAGGCAACCAATGAATACAATAAAATATGTAAATAAAGCTAAAGAAATTTTTTCAAAACAAGCAGGACAAGATATGAA
TATTGCTTTATCTCAAAATCTTTTAGGACTAACTGCCATACAAACAAAGCAATATGAACAAGCAGAAGAGTGTCTAAATT
CAGCGATAGATATTCTACAAAAACAGGATAACGCTATATTGCTTTTAAGGGTACGTCATAATTTAGGATGGCTATACGCA
AGTCAAAACCTTTCTGCACTAGCTATTCGACATCTTTCGGAAGTAACAGAGAAATTCCCAGCACATTTCAAAGCGATTTT
CCTACAAGCTAGGGAACATTTTAAACTGGGAGAAACAAACATTGCTGAAGAATTAATTGATAGAGGATTAAATATTTGTA
TCGAGTTAGAAAATGAAGAGTATATACATCATTTTAGTATTTTAAAAGCAGTAAATGGTAATGTTCCTATTAAAGAATTA
GAGCAGATTATCCTTAAAGGAATTACTTATTTTGATAAAGAATCTTTATATAGTTACACTCAGGAATATGTGGAAAAACT
TGCAATAAAGTTTCGTGAGGATGCTAATTACATGAAAGCAAGTGATTATTTTTACAAAGCATTACAGGCAAAAGAGAAGA
AGATAGAGAGAGGAGCATTAAAATAA

Upstream 100 bases:

>100_bases
TCAAAAAGGAAAACTTTGGTATAATTAGTTAAAATATTTAATTTTCTGATAATTGTTTTTCAATACATAGAAAAGAGGTG
GTAATATACAATTTGGATAA

Downstream 100 bases:

>100_bases
TGTTTAAAAAAATAGGTATGGCTGTAACTGGTATAGTGTTAGTTGGTATTGTATCTGTCGGTTTAAATAGTTCTTTTGTA
CAACAAGCGGAGCACGGTGA

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MYKYPNFVSSKRRGCECMGADVVTREQMKHSLDDWYRVMLQQNIEKATEMKEDIESGFSNVKEDGDLWLYYSLLDFRYKV
LADGLQITKNSFDKIDEIYKTSENRLSYYYYFFKAMHATLISNYNDASRCYEKAKALIKYIPDELEYGEFCYRLSAFFYN
TRQPMNTIKYVNKAKEIFSKQAGQDMNIALSQNLLGLTAIQTKQYEQAEECLNSAIDILQKQDNAILLLRVRHNLGWLYA
SQNLSALAIRHLSEVTEKFPAHFKAIFLQAREHFKLGETNIAEELIDRGLNICIELENEEYIHHFSILKAVNGNVPIKEL
EQIILKGITYFDKESLYSYTQEYVEKLAIKFREDANYMKASDYFYKALQAKEKKIERGALK

Sequences:

>Translated_381_residues
MYKYPNFVSSKRRGCECMGADVVTREQMKHSLDDWYRVMLQQNIEKATEMKEDIESGFSNVKEDGDLWLYYSLLDFRYKV
LADGLQITKNSFDKIDEIYKTSENRLSYYYYFFKAMHATLISNYNDASRCYEKAKALIKYIPDELEYGEFCYRLSAFFYN
TRQPMNTIKYVNKAKEIFSKQAGQDMNIALSQNLLGLTAIQTKQYEQAEECLNSAIDILQKQDNAILLLRVRHNLGWLYA
SQNLSALAIRHLSEVTEKFPAHFKAIFLQAREHFKLGETNIAEELIDRGLNICIELENEEYIHHFSILKAVNGNVPIKEL
EQIILKGITYFDKESLYSYTQEYVEKLAIKFREDANYMKASDYFYKALQAKEKKIERGALK
>Mature_381_residues
MYKYPNFVSSKRRGCECMGADVVTREQMKHSLDDWYRVMLQQNIEKATEMKEDIESGFSNVKEDGDLWLYYSLLDFRYKV
LADGLQITKNSFDKIDEIYKTSENRLSYYYYFFKAMHATLISNYNDASRCYEKAKALIKYIPDELEYGEFCYRLSAFFYN
TRQPMNTIKYVNKAKEIFSKQAGQDMNIALSQNLLGLTAIQTKQYEQAEECLNSAIDILQKQDNAILLLRVRHNLGWLYA
SQNLSALAIRHLSEVTEKFPAHFKAIFLQAREHFKLGETNIAEELIDRGLNICIELENEEYIHHFSILKAVNGNVPIKEL
EQIILKGITYFDKESLYSYTQEYVEKLAIKFREDANYMKASDYFYKALQAKEKKIERGALK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 44731; Mature: 44731

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50293 TPR_REGION ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKYPNFVSSKRRGCECMGADVVTREQMKHSLDDWYRVMLQQNIEKATEMKEDIESGFSN
CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKEDGDLWLYYSLLDFRYKVLADGLQITKNSFDKIDEIYKTSENRLSYYYYFFKAMHATL
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ISNYNDASRCYEKAKALIKYIPDELEYGEFCYRLSAFFYNTRQPMNTIKYVNKAKEIFSK
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QAGQDMNIALSQNLLGLTAIQTKQYEQAEECLNSAIDILQKQDNAILLLRVRHNLGWLYA
HCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEE
SQNLSALAIRHLSEVTEKFPAHFKAIFLQAREHFKLGETNIAEELIDRGLNICIELENEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCH
YIHHFSILKAVNGNVPIKELEQIILKGITYFDKESLYSYTQEYVEKLAIKFREDANYMKA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SDYFYKALQAKEKKIERGALK
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYKYPNFVSSKRRGCECMGADVVTREQMKHSLDDWYRVMLQQNIEKATEMKEDIESGFSN
CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKEDGDLWLYYSLLDFRYKVLADGLQITKNSFDKIDEIYKTSENRLSYYYYFFKAMHATL
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ISNYNDASRCYEKAKALIKYIPDELEYGEFCYRLSAFFYNTRQPMNTIKYVNKAKEIFSK
HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QAGQDMNIALSQNLLGLTAIQTKQYEQAEECLNSAIDILQKQDNAILLLRVRHNLGWLYA
HCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEE
SQNLSALAIRHLSEVTEKFPAHFKAIFLQAREHFKLGETNIAEELIDRGLNICIELENEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCH
YIHHFSILKAVNGNVPIKELEQIILKGITYFDKESLYSYTQEYVEKLAIKFREDANYMKA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SDYFYKALQAKEKKIERGALK
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]