| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is licT [H]
Identifier: 118476453
GI number: 118476453
Start: 826587
End: 828542
Strand: Direct
Name: licT [H]
Synonym: BALH_0718
Alternate gene names: 118476453
Gene position: 826587-828542 (Clockwise)
Preceding gene: 118476452
Following gene: 118476454
Centisome position: 15.72
GC content: 33.08
Gene sequence:
>1956_bases GTGAGAGGAAGAGCTATGACAAAGGTGCATCAGCGATTAATTTCTATTTTAGAAGAGTTTTTAGAAGAGAAATCGATGTT AAATCGAGCTTTTTTAGCGAGCCGTTTACATGTATCAACGAAGACGATTCAAAAAGATATAAAATTATTAAATGATATAT TGGAAGAAAACGGAGCGAAAATTGAATCGCAAAGAGGGACTGGATACGAGTTAGAAATTATACAAACGAAGAAGTTTGAA GAATTTTGCGTGAGTCTATTTCAAAAGCAGACGGAAAAGGTCCCAACTTCTTATGAAGAAAGGATAGCGTACATTCTGCA ACGTATTTTAACCACCGAGGGATATGTGAAGCTTTCACAGTTAGCAGAGGAGATTTATGTAAGTAAATCGACTGTAAATT TAATTATGAAAGATGTTACAGATATATGTGGTCGCTATCAATTACAAATTGAAAAGAGACCGTATTATGGTATACGTATT GTCGGAGAGGAGTTTCATATTCGTTCTTGTTTATCACAATATGGTTTGCCGCGTTATGACCATACGCCGTTTCATGAGCG ATTTGAGCAGAATGATACATATGTATCGTTACCTCATATCCCGCTTATCCGTTCGGTTATATTAAAGTATATTGAAGGTG GAACAATCTATTTATCAGATATAGAAATTGATAATTTAGTCATTCATATTGCAATTGCATTAAAGCGTTGTGAAGATCAA CATTATATGAAAGGACTAAATGCGGAGCAATCAGAACTCATAATAAAGAAAGAATATACAATTGCGAAACAGATTGTAGG GGAGTTAGAGAAAGAGTTGCATCTTTCATTTCCGAAAGAAGAAGTTTTATATGTGACAATGCATTTATTAAGTACTGCTG TCACATCGAAAGATCGTTATGAAAATGTGGAAGAACTATTAGGGAAAGATTTATATGCATTCATGCAACATATTCTTTTT AAAGTAGCGGAAGAACGGAATCTTATTTTTTATTATGATGAAGAATTATTATTTGGATTTGGTGTTCATTTAAAAACGTT ATTAAACCGTTTGAAGTATAAGTTAAATACGAGAAACCCTCTTTTGGCAGAAGTGAAAAAGAATTATCCGTATGCTTTTG AAATTGCGGTTCTCGTTGGGGATATAATTGGTGAATATACAGGTGAGTCGATTCCGGAAAGTGAAATTGGTTATATTGCC ATTCACTTCGGCGGAGCGATGAGTCGTTTACAAGAACAGAATCAAAAGAAAAGATGTTTATTAGTTTGTGCGACTGGTCA AGGAAGCGCCCAGCTATTGAAATATAAAATTTTATCACAGTTCCGAGATAAATTAGAGATTGTAGGGATTACAGGCTATT ATCAATTGAAAGTAGAAGATCTCTACAAAGAAAAGATAGATTGTATTATTAGTACGATTCATATACCAAGTGGTTTACCT GTACCTGTTATAAAAGTAAACTCAATATTTGATGATAAAGAGATTAAGTCAATTGGTCAGCAGTTGTTTACGCATGTGAA TAATAGTGTGCAGCAATATATGAAGGAAGATTTAATCTTTTTAAATCATAGTGCTTCTACGAAGGAAGAGGTTATCCAAT TTTTATGTGAGAAAGCTACTGAGAAAAACTATGTACCAGAAAACTTTTATGAATCTGTTATGGAAAGAGAGAGTACATCT CCTACAGCGGTCGGGAATTTAGTTGCGATTCCACATCCGATGCAGTTATTAAGTGAGAAAACATTTTTGATGTTTTGTAC ACTTAATAAAGCGGTTGACTGGGGAGATAAGAAAGTACAAGTTATTATTTTATTTAGTGTAAAGCGCAATAATAATGAAG ATTTACAAAAGCTTTATGATTTTTTATATGATATTATGTCTAATCAAAATACGATAGAGAAATTAGCTCAGGCTAAAGTG GTTGAAGATTTTCAAGAGATATTATTATCGTTATAA
Upstream 100 bases:
>100_bases TACAAGCATGGGATAAATTCGGATTTACATTAAAGAAATAGATAAAATAAAAGGGAAAAACTACTGACTTCAGCAGCTTT TTCCTTTTTATATATATAGA
Downstream 100 bases:
>100_bases GAGAAGTATATAAAAACTTCCGTTACACAACGGAAGTTTTTTATATTTAATTGTATGCGTTTTCATAATAAGATGAAAAT ATAGAAAAAAGATAGCTTGG
Product: BigG family transcription antiterminator
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MRGRAMTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFE EFCVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRI VGEEFHIRSCLSQYGLPRYDHTPFHERFEQNDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQ HYMKGLNAEQSELIIKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILF KVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIA IHFGGAMSRLQEQNQKKRCLLVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLP VPVIKVNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKATEKNYVPENFYESVMERESTS PTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQVIILFSVKRNNNEDLQKLYDFLYDIMSNQNTIEKLAQAKV VEDFQEILLSL
Sequences:
>Translated_651_residues MRGRAMTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFE EFCVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRI VGEEFHIRSCLSQYGLPRYDHTPFHERFEQNDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQ HYMKGLNAEQSELIIKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILF KVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIA IHFGGAMSRLQEQNQKKRCLLVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLP VPVIKVNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKATEKNYVPENFYESVMERESTS PTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQVIILFSVKRNNNEDLQKLYDFLYDIMSNQNTIEKLAQAKV VEDFQEILLSL >Mature_651_residues MRGRAMTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAKIESQRGTGYELEIIQTKKFE EFCVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQLAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRI VGEEFHIRSCLSQYGLPRYDHTPFHERFEQNDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQ HYMKGLNAEQSELIIKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRYENVEELLGKDLYAFMQHILF KVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNPLLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIA IHFGGAMSRLQEQNQKKRCLLVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLP VPVIKVNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKATEKNYVPENFYESVMERESTS PTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQVIILFSVKRNNNEDLQKLYDFLYDIMSNQNTIEKLAQAKV VEDFQEILLSL
Specific function: Positive regulator of the licABCH operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790027, Length=134, Percent_Identity=29.1044776119403, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 75377; Mature: 75377
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRAMTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IESQRGTGYELEIIQTKKFEEFCVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQ EECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH LAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYD HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCC HTPFHERFEQNDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQ CCCHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCHH HYMKGLNAEQSELIIKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRY HHHCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHH ENVEELLGKDLYAFMQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNP HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCC LLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCL HHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEEE LVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLP EEEECCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHHHHHHHHHHEECCCCCC VPVIKVNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAT CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH EKNYVPENFYESVMERESTSPTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQ CCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHCCCCEEEEEEECHHCCCCCCEEE VIILFSVKRNNNEDLQKLYDFLYDIMSNQNTIEKLAQAKVVEDFQEILLSL EEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGRAMTKVHQRLISILEEFLEEKSMLNRAFLASRLHVSTKTIQKDIKLLNDILEENGAK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE IESQRGTGYELEIIQTKKFEEFCVSLFQKQTEKVPTSYEERIAYILQRILTTEGYVKLSQ EECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHH LAEEIYVSKSTVNLIMKDVTDICGRYQLQIEKRPYYGIRIVGEEFHIRSCLSQYGLPRYD HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCC HTPFHERFEQNDTYVSLPHIPLIRSVILKYIEGGTIYLSDIEIDNLVIHIAIALKRCEDQ CCCHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCHH HYMKGLNAEQSELIIKKEYTIAKQIVGELEKELHLSFPKEEVLYVTMHLLSTAVTSKDRY HHHCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHH ENVEELLGKDLYAFMQHILFKVAEERNLIFYYDEELLFGFGVHLKTLLNRLKYKLNTRNP HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCC LLAEVKKNYPYAFEIAVLVGDIIGEYTGESIPESEIGYIAIHFGGAMSRLQEQNQKKRCL HHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCEEE LVCATGQGSAQLLKYKILSQFRDKLEIVGITGYYQLKVEDLYKEKIDCIISTIHIPSGLP EEEECCCCHHHHHHHHHHHHHHCCEEEEEECCEEEEEHHHHHHHHHHHHHHHEECCCCCC VPVIKVNSIFDDKEIKSIGQQLFTHVNNSVQQYMKEDLIFLNHSASTKEEVIQFLCEKAT CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH EKNYVPENFYESVMERESTSPTAVGNLVAIPHPMQLLSEKTFLMFCTLNKAVDWGDKKVQ CCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHCCCCEEEEEEECHHCCCCCCEEE VIILFSVKRNNNEDLQKLYDFLYDIMSNQNTIEKLAQAKVVEDFQEILLSL EEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377; 10438772 [H]