Click here to switch to the map view.

The map label for this gene is oppB [H]

Identifier: 118476343

GI number: 118476343

Start: 695874

End: 696842

Strand: Reverse

Name: oppB [H]

Synonym: BALH_0599

Alternate gene names: 118476343

Gene position: 696842-695874 (Counterclockwise)

Preceding gene: 118476344

Following gene: 118476342

Centisome position: 13.26

GC content: 35.81

Gene sequence:

>969_bases
ATGTGGAAATTTATATTACGCCGGATTTTAGTTATGATACCGCAATTATTCGTATTAAGCGTACTCGTCTTTACACTTGC
TAAAGCAATGCCAGGTGATGCATTAAGTGGCGCTGAACTAGCAAACCCAAAAGCCGATCCAAAAGTAATTGAAGAACAAC
GTGAGAAACTTGGGTTAAATGATCCTATTCCCACACAATATGTAAGGTGGATTTCAAATGCCGTACAAGGAGATTTCGGT
ATTTCTTACGCACATAAAATACAAGTAACAGATATTATTGGGGAACGCCTTGGTAATACAGTGCTGTTAGCTCTTCTAAT
TCTTATTCTTACTTATTTAATTGCCATTCCACTTGGCGTTATAAGTGGACGTTGGAATGATACGTGGGCTGATCGACTCA
TTACACTCTATAACTTTTTAGGATTTGGTACACCCCTATTTATTTTTGGATTAGTAATGTTATTCTTATTCGGCTTTTTA
TACCCAATCTTCCCTACAAGTGGTAGCGTTGATCCACAAGTTGCAACCGGATCATTTGATTACTATTTAAGTAAATTAAA
TCATATGATTTTACCGGCTTTATCTGGGGCATTAATTGGCACAGTAGGAACTGTACAATATTTACGCAGTGAAATTATTG
ATACGAAACATAAAGATTTTGTACGCACAGTAAAAGCAAAAGGTGTACCAGAATCTAAAGTATATTCCAGACATATTTTA
CGAAATTCATTTTTACCAATTGCAGCATTTTTAGGATATGAAATTACAGGTTTAGTTGGTGGCTCTATTATTCTAGAAAA
TATTTTCGGCTACCCTGGAATTGGACAACTATTTTTCCAATCTATCACTCAACGTGATTTCAGTGTCGTAACTGCTCTTG
TATTATTTACTGGATTCGCAACGCTACTCGGGACTCTTCTTTCCGATATTATTCTAAGCATCGTTGATCCACGTATTCGT
ATTGATTAA

Upstream 100 bases:

>100_bases
AATCATACGAAAATTATTTCAATGAAAATGGACGTGCTTACGATTTAAAACCAATCTCGCCAACTCACCGGGTGGCATTA
CCATAAGGGAGTGATAAAAC

Downstream 100 bases:

>100_bases
TGGAGGTGAAGAAACGTTATGTTAGCAAATCCTGAAAAACAAACTGAAGTCATTCATTACGAAAAGAGCCCTTCTGGTTT
CTCCATTATGTGGCGAGAAT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MWKFILRRILVMIPQLFVLSVLVFTLAKAMPGDALSGAELANPKADPKVIEEQREKLGLNDPIPTQYVRWISNAVQGDFG
ISYAHKIQVTDIIGERLGNTVLLALLILILTYLIAIPLGVISGRWNDTWADRLITLYNFLGFGTPLFIFGLVMLFLFGFL
YPIFPTSGSVDPQVATGSFDYYLSKLNHMILPALSGALIGTVGTVQYLRSEIIDTKHKDFVRTVKAKGVPESKVYSRHIL
RNSFLPIAAFLGYEITGLVGGSIILENIFGYPGIGQLFFQSITQRDFSVVTALVLFTGFATLLGTLLSDIILSIVDPRIR
ID

Sequences:

>Translated_322_residues
MWKFILRRILVMIPQLFVLSVLVFTLAKAMPGDALSGAELANPKADPKVIEEQREKLGLNDPIPTQYVRWISNAVQGDFG
ISYAHKIQVTDIIGERLGNTVLLALLILILTYLIAIPLGVISGRWNDTWADRLITLYNFLGFGTPLFIFGLVMLFLFGFL
YPIFPTSGSVDPQVATGSFDYYLSKLNHMILPALSGALIGTVGTVQYLRSEIIDTKHKDFVRTVKAKGVPESKVYSRHIL
RNSFLPIAAFLGYEITGLVGGSIILENIFGYPGIGQLFFQSITQRDFSVVTALVLFTGFATLLGTLLSDIILSIVDPRIR
ID
>Mature_322_residues
MWKFILRRILVMIPQLFVLSVLVFTLAKAMPGDALSGAELANPKADPKVIEEQREKLGLNDPIPTQYVRWISNAVQGDFG
ISYAHKIQVTDIIGERLGNTVLLALLILILTYLIAIPLGVISGRWNDTWADRLITLYNFLGFGTPLFIFGLVMLFLFGFL
YPIFPTSGSVDPQVATGSFDYYLSKLNHMILPALSGALIGTVGTVQYLRSEIIDTKHKDFVRTVKAKGVPESKVYSRHIL
RNSFLPIAAFLGYEITGLVGGSIILENIFGYPGIGQLFFQSITQRDFSVVTALVLFTGFATLLGTLLSDIILSIVDPRIR
ID

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=321, Percent_Identity=33.6448598130841, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787497, Length=323, Percent_Identity=31.2693498452012, Blast_Score=168, Evalue=5e-43,
Organism=Escherichia coli, GI1789888, Length=321, Percent_Identity=31.4641744548287, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1789965, Length=340, Percent_Identity=28.8235294117647, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1787761, Length=333, Percent_Identity=29.1291291291291, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=26.3736263736264, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1787550, Length=331, Percent_Identity=25.6797583081571, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35646; Mature: 35646

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKFILRRILVMIPQLFVLSVLVFTLAKAMPGDALSGAELANPKADPKVIEEQREKLGLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCC
DPIPTQYVRWISNAVQGDFGISYAHKIQVTDIIGERLGNTVLLALLILILTYLIAIPLGV
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGRWNDTWADRLITLYNFLGFGTPLFIFGLVMLFLFGFLYPIFPTSGSVDPQVATGSFD
HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
YYLSKLNHMILPALSGALIGTVGTVQYLRSEIIDTKHKDFVRTVKAKGVPESKVYSRHIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
RNSFLPIAAFLGYEITGLVGGSIILENIFGYPGIGQLFFQSITQRDFSVVTALVLFTGFA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLGTLLSDIILSIVDPRIRID
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MWKFILRRILVMIPQLFVLSVLVFTLAKAMPGDALSGAELANPKADPKVIEEQREKLGLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCC
DPIPTQYVRWISNAVQGDFGISYAHKIQVTDIIGERLGNTVLLALLILILTYLIAIPLGV
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGRWNDTWADRLITLYNFLGFGTPLFIFGLVMLFLFGFLYPIFPTSGSVDPQVATGSFD
HCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
YYLSKLNHMILPALSGALIGTVGTVQYLRSEIIDTKHKDFVRTVKAKGVPESKVYSRHIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
RNSFLPIAAFLGYEITGLVGGSIILENIFGYPGIGQLFFQSITQRDFSVVTALVLFTGFA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLGTLLSDIILSIVDPRIRID
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244921; 11337471 [H]