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The map label for this gene is oppA [H]

Identifier: 118476341

GI number: 118476341

Start: 693154

End: 694935

Strand: Reverse

Name: oppA [H]

Synonym: BALH_0597

Alternate gene names: 118476341

Gene position: 694935-693154 (Counterclockwise)

Preceding gene: 118476342

Following gene: 118476337

Centisome position: 13.22

GC content: 34.06

Gene sequence:

>1782_bases
ATGAACAAACCAAAACTGTACAAAGTATTAAGTACACTTGCTGCTTCAACATTATTACTATCTGCATGTGGGGGGGCTGA
TAGCGGTAGCAAGAAAGCAAACACGAAAAAAGTAGAAACAAATAAATTTAGCTCTGCTGTAAAAAATGATGGTAAAGAAA
TTAAAGATGGATCATTAACTTATGGACTCGTTTCGAATTCACCCTTCGCTGGTGTTTTAAGTAGAGTATTGTATGAAGTT
GCTCCAGATTCAGAAATTATGGATTTCTTTGATGAACAATTATTAGCTACAGATAAAAACTGGGAAATTACAAATGATGG
TGCTGCAACTTATACAATTTCTGAAGATAAAAAAACAATTACAATTAAGATTAAAGATAATGTAAAATGGCACGATGGTA
ACCCTTTAACAGCTGAGGATTTAGAATATTCTTACTTGATTATTGGTAATAGTAAATATACAGGTATCCGTTACGATACA
CAAATGCAAATGATTGAAGGTATGGAAGAATATCACGCTGGAAAAGCTGACAAAATTTCCGGTATTAAAGTAGTCGATCC
AAAAACAATTTCGATTACTTATAAAGAAGTAAACCCTTCACTGAAAACTGGTATTTGGACATATCCTACACCTAAAAAAT
ATTTAGGAGATATACCAATTGAAAAACTAGCTGAATCTGATAAGATCCGTCAAAATCCAATTGGATTCGGACCATTTAAA
GTGAAGAAAATTGTTCCTGGTGAATCAGTTGAGTATGAGCGCTTCGATGATTACTGGGCTGGCAAACCTAAACTAAAAAA
TGTAACATTAAAAGTTGTAAATCCATCTATTGTTAGTGCATCCCTGAAAAAAGGTGATATTGATATTGCAGCAATTACTG
CTGATCAATATCCGAACGTAAGTAAATTAAAAAATACACAACTAATTGGTAAAACTGACCTTGCTTACACTTATATCGGA
TTTAAATTTGGACATATGGACAAAGCAAAGAACGAAGCTGTAATGGATAAAGACAAGTTCAAAGATGTTCGTTTACGTCA
AGCGATGGCATATGCAATTGACAGAGAAAAATTAGGAGAAAAAGTATATCACGGACTTCGCATTCCAGCTAACTCTCCAA
TTCCACCATCTATGCCAAAGTATCATAATAACGATATTGGGGCATATAACTTAGATGTAGATAAAGCGAAAAAACTATTA
GATGAAGCTGGCTATAAAGATAAAAATGGTGACGGCTTCCGTGAAGATCCAAAAGGTAATGAATTCAAAATTAACTTCTT
AGCTAGTAATGGTAGTGAAACGAGTGAACCACTTGCAAAATTCTATATTCAATCTTGGAAAGATATCGGCTTAAAAGTAG
AGCTTGTTGACGGACGATTACACGAATTTAATGCTATGCGTGACATGATTAAAAAAGATGATCCGAAAGTTGATATTTTC
TCTGGTGCTTGGGGAACAGGTTCTGACCCTGATTTATCTGGGCTTTGGGGCAAAAACGCTGGATTTAACTACCAGCGCTG
GGTAAATGATGAAAATACAAAATTATTAAATGAAGGGTTATCTGCAAAAGCTACTGATGAAAAATATCGTAAAGAAGTAT
ACGATAAATGGCAAAAATTAATTCATGATGAAGCAGCGATGATTCCAATTCATTACACATTCGATTTAACAGGTGTTAAT
AAACGCGTGAAAGATTTTAATGTCAATGCCGAAGTGAACCAAATTACTTCACAATGGAAAGACGTTACTGTAACAAGTGA
GAAGCCAGAAGTAGAAAAATAA

Upstream 100 bases:

>100_bases
TCATGATTTTAGTGTTGATGCTGTGTATAAATTTTATTGGTCAAGCGTTAAAGCGTGCGGCTGATGCGAGACAAAGAAAA
GGATAAGGGGTGGAGAAGTT

Downstream 100 bases:

>100_bases
TCATAAAAATAGCTCTTAGCATTTACTTACTGCTAAGAGCTATTTTTTCTGTACAATCCTTCTAATACTATTAATAACAA
CCAATTCCTTCCCCACTCTA

Product: oligopeptide transporter, periplasmic-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MNKPKLYKVLSTLAASTLLLSACGGADSGSKKANTKKVETNKFSSAVKNDGKEIKDGSLTYGLVSNSPFAGVLSRVLYEV
APDSEIMDFFDEQLLATDKNWEITNDGAATYTISEDKKTITIKIKDNVKWHDGNPLTAEDLEYSYLIIGNSKYTGIRYDT
QMQMIEGMEEYHAGKADKISGIKVVDPKTISITYKEVNPSLKTGIWTYPTPKKYLGDIPIEKLAESDKIRQNPIGFGPFK
VKKIVPGESVEYERFDDYWAGKPKLKNVTLKVVNPSIVSASLKKGDIDIAAITADQYPNVSKLKNTQLIGKTDLAYTYIG
FKFGHMDKAKNEAVMDKDKFKDVRLRQAMAYAIDREKLGEKVYHGLRIPANSPIPPSMPKYHNNDIGAYNLDVDKAKKLL
DEAGYKDKNGDGFREDPKGNEFKINFLASNGSETSEPLAKFYIQSWKDIGLKVELVDGRLHEFNAMRDMIKKDDPKVDIF
SGAWGTGSDPDLSGLWGKNAGFNYQRWVNDENTKLLNEGLSAKATDEKYRKEVYDKWQKLIHDEAAMIPIHYTFDLTGVN
KRVKDFNVNAEVNQITSQWKDVTVTSEKPEVEK

Sequences:

>Translated_593_residues
MNKPKLYKVLSTLAASTLLLSACGGADSGSKKANTKKVETNKFSSAVKNDGKEIKDGSLTYGLVSNSPFAGVLSRVLYEV
APDSEIMDFFDEQLLATDKNWEITNDGAATYTISEDKKTITIKIKDNVKWHDGNPLTAEDLEYSYLIIGNSKYTGIRYDT
QMQMIEGMEEYHAGKADKISGIKVVDPKTISITYKEVNPSLKTGIWTYPTPKKYLGDIPIEKLAESDKIRQNPIGFGPFK
VKKIVPGESVEYERFDDYWAGKPKLKNVTLKVVNPSIVSASLKKGDIDIAAITADQYPNVSKLKNTQLIGKTDLAYTYIG
FKFGHMDKAKNEAVMDKDKFKDVRLRQAMAYAIDREKLGEKVYHGLRIPANSPIPPSMPKYHNNDIGAYNLDVDKAKKLL
DEAGYKDKNGDGFREDPKGNEFKINFLASNGSETSEPLAKFYIQSWKDIGLKVELVDGRLHEFNAMRDMIKKDDPKVDIF
SGAWGTGSDPDLSGLWGKNAGFNYQRWVNDENTKLLNEGLSAKATDEKYRKEVYDKWQKLIHDEAAMIPIHYTFDLTGVN
KRVKDFNVNAEVNQITSQWKDVTVTSEKPEVEK
>Mature_593_residues
MNKPKLYKVLSTLAASTLLLSACGGADSGSKKANTKKVETNKFSSAVKNDGKEIKDGSLTYGLVSNSPFAGVLSRVLYEV
APDSEIMDFFDEQLLATDKNWEITNDGAATYTISEDKKTITIKIKDNVKWHDGNPLTAEDLEYSYLIIGNSKYTGIRYDT
QMQMIEGMEEYHAGKADKISGIKVVDPKTISITYKEVNPSLKTGIWTYPTPKKYLGDIPIEKLAESDKIRQNPIGFGPFK
VKKIVPGESVEYERFDDYWAGKPKLKNVTLKVVNPSIVSASLKKGDIDIAAITADQYPNVSKLKNTQLIGKTDLAYTYIG
FKFGHMDKAKNEAVMDKDKFKDVRLRQAMAYAIDREKLGEKVYHGLRIPANSPIPPSMPKYHNNDIGAYNLDVDKAKKLL
DEAGYKDKNGDGFREDPKGNEFKINFLASNGSETSEPLAKFYIQSWKDIGLKVELVDGRLHEFNAMRDMIKKDDPKVDIF
SGAWGTGSDPDLSGLWGKNAGFNYQRWVNDENTKLLNEGLSAKATDEKYRKEVYDKWQKLIHDEAAMIPIHYTFDLTGVN
KRVKDFNVNAEVNQITSQWKDVTVTSEKPEVEK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=496, Percent_Identity=26.4112903225806, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1787052, Length=471, Percent_Identity=23.3545647558386, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789887, Length=454, Percent_Identity=24.6696035242291, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1789397, Length=484, Percent_Identity=25, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787762, Length=492, Percent_Identity=25, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1787495, Length=492, Percent_Identity=25.609756097561, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI87081878, Length=499, Percent_Identity=25.4509018036072, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87082063, Length=277, Percent_Identity=23.1046931407942, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787551, Length=429, Percent_Identity=21.9114219114219, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66576; Mature: 66576

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPKLYKVLSTLAASTLLLSACGGADSGSKKANTKKVETNKFSSAVKNDGKEIKDGSLT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEE
YGLVSNSPFAGVLSRVLYEVAPDSEIMDFFDEQLLATDKNWEITNDGAATYTISEDKKTI
EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCEEE
TIKIKDNVKWHDGNPLTAEDLEYSYLIIGNSKYTGIRYDTQMQMIEGMEEYHAGKADKIS
EEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCCCC
GIKVVDPKTISITYKEVNPSLKTGIWTYPTPKKYLGDIPIEKLAESDKIRQNPIGFGPFK
CEEEECCCEEEEEEEECCCCHHCCEECCCCCHHHHCCCCHHHHHCCCCHHCCCCCCCCEE
VKKIVPGESVEYERFDDYWAGKPKLKNVTLKVVNPSIVSASLKKGDIDIAAITADQYPNV
EEEECCCCCCCHHCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCEEEEEEECCCCCCH
SKLKNTQLIGKTDLAYTYIGFKFGHMDKAKNEAVMDKDKFKDVRLRQAMAYAIDREKLGE
HHHCCCEEECCCCCEEEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KVYHGLRIPANSPIPPSMPKYHNNDIGAYNLDVDKAKKLLDEAGYKDKNGDGFREDPKGN
HHHCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
EFKINFLASNGSETSEPLAKFYIQSWKDIGLKVELVDGRLHEFNAMRDMIKKDDPKVDIF
EEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEE
SGAWGTGSDPDLSGLWGKNAGFNYQRWVNDENTKLLNEGLSAKATDEKYRKEVYDKWQKL
ECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IHDEAAMIPIHYTFDLTGVNKRVKDFNVNAEVNQITSQWKDVTVTSEKPEVEK
HCCCCEEEEEEEEEEECCCCCCHHEECCCCHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure
MNKPKLYKVLSTLAASTLLLSACGGADSGSKKANTKKVETNKFSSAVKNDGKEIKDGSLT
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEE
YGLVSNSPFAGVLSRVLYEVAPDSEIMDFFDEQLLATDKNWEITNDGAATYTISEDKKTI
EEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCEEE
TIKIKDNVKWHDGNPLTAEDLEYSYLIIGNSKYTGIRYDTQMQMIEGMEEYHAGKADKIS
EEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCCCCC
GIKVVDPKTISITYKEVNPSLKTGIWTYPTPKKYLGDIPIEKLAESDKIRQNPIGFGPFK
CEEEECCCEEEEEEEECCCCHHCCEECCCCCHHHHCCCCHHHHHCCCCHHCCCCCCCCEE
VKKIVPGESVEYERFDDYWAGKPKLKNVTLKVVNPSIVSASLKKGDIDIAAITADQYPNV
EEEECCCCCCCHHCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCCEEEEEEECCCCCCH
SKLKNTQLIGKTDLAYTYIGFKFGHMDKAKNEAVMDKDKFKDVRLRQAMAYAIDREKLGE
HHHCCCEEECCCCCEEEEEEEEECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KVYHGLRIPANSPIPPSMPKYHNNDIGAYNLDVDKAKKLLDEAGYKDKNGDGFREDPKGN
HHHCCEECCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
EFKINFLASNGSETSEPLAKFYIQSWKDIGLKVELVDGRLHEFNAMRDMIKKDDPKVDIF
EEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEE
SGAWGTGSDPDLSGLWGKNAGFNYQRWVNDENTKLLNEGLSAKATDEKYRKEVYDKWQKL
ECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH
IHDEAAMIPIHYTFDLTGVNKRVKDFNVNAEVNQITSQWKDVTVTSEKPEVEK
HCCCCEEEEEEEEEEECCCCCCHHEECCCCHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8244921 [H]