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The map label for this gene is arcD [H]

Identifier: 118476311

GI number: 118476311

Start: 656420

End: 657817

Strand: Reverse

Name: arcD [H]

Synonym: BALH_0566

Alternate gene names: 118476311

Gene position: 657817-656420 (Counterclockwise)

Preceding gene: 118476315

Following gene: 118476308

Centisome position: 12.51

GC content: 36.91

Gene sequence:

>1398_bases
ATGGAAACGAAAAAATGGGGATTATGGGTTTTAACAGCTTTTGTTATCGGGAATATGGTTGGCGGTGGCGTATTTATGCT
CCCAGCAAATTTAGCACAAGTATCAGGTCCAATGGGCTCTACACTTGCATGGAGTATTACAGGCCTTGGCGTATTTATGA
TTGCACTCGTATTTGGAAATTTGGCAATTCGAAAGCCAGAATTAAAAGCAGGACCACAAAGCTATGCTCAAGCAATGTTC
CCTTCAAAAAAGGCGGGTAAAGTTGCAGGATATAGTATGGCATGGGGATATTGGGCAGCGAACTGGGCTGCAACAGCATC
TGTTATTATTTCCTTTGCTGGATATTTATCAACATTCTTTCCAGTTTTACAAAGTAAGCAAATTCTCTTTTCAACGAACG
GATTTTCACTAGAACTCGGAAAAGGATTAACTTTCCTCGTATGTAGCCTTATGCTATGGGGAATTCAATATATTCTTTCT
CAAAATATTGATCGAGCTGGCAATATGAATCTTCTTGCTACCATTGCAAAGATTATCGGATTTACAATGTTTATTGTAAT
TACGTTATTCATTTTCAATGCCTCTAATTTTGGAGACGGTCAAACATTTATGAATGAAGCGGGACAATCCATTTCGTTAG
GTGGACAAATCAATTCAGCTGCTATTGCAACACTTTGGGCGTTTATCGGTATTGAATCGGCTGTCATGCTTTCTAATCGT
GCAAAATCTCAGCGCGATGTAAAGAAAGCTACCATTTTCGGATTAATTATCGCTCTTCTTATTTACATGTCAATTACTCT
ACTTACAATGGGCGCTCTCCCGCAAGATGCTTTAAAAGAGTCTCAAAAACCATTAGTAGACGCATTAAATTTAGCAATTG
GCAATAAAGGCGCCTATATCATGGCTTTACTTGCACTTGTATCTTTATTTGGATCTACAGTTGGCTGGATTGTTGTTAGT
TCAGAAGTACCTTACCAGGCAGCAAAGAATGGACTTTTCCCTAAATTTTTCGCGAAAACAAATAAAAAAGGTAGTCCTTC
AAAATCATTATTGATTACAAATGTGATGACGCAAATTTTCTTATTCTCAACGATTTCTGGTACTGTATCAGAAGCTTATA
ATTTCGCTATCGTTGTAGCAACATTAGCTTATTTAATTCCATATCTTATTTCTACGCTGTACCAATTCAAATTAGTTATT
ACAGGAGAAACGTATGATATACTGCCTGGTTCTCGAATAAAGGACGGGATCATTACGACATTAGCATTTGTATACTCTAT
TTGGGTTATCAAAACCGGAACTGCTGATTTAAAAACGTTCTTCTTAGGCATCGGATTGTTCGTATTAGGTCTTATTCTTT
ATCCTGTACTAATGAAAGACTCACAAAAAATGAATTAA

Upstream 100 bases:

>100_bases
CATGTAGGTATTTTTTTATCTACATGGCTCTTTTTTTATTGTCAAAAAGCTAGTAAAAAATGATGTTTAAGCAAATCTTA
CTACAAAGGAGTTAACAAAA

Downstream 100 bases:

>100_bases
AAAAGGAGAAGCTTCTGGCTTCTCTTTTTTATTAGAAGTCTATAATTAACTTTTCCTTTAACTCTGCTGCCGATAAAGGT
TTCGCATAATAAAAACCTTG

Product: arginine/ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALVSLFGSTVGWIVVS
SEVPYQAAKNGLFPKFFAKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYNFAIVVATLAYLIPYLISTLYQFKLVI
TGETYDILPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN

Sequences:

>Translated_465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALVSLFGSTVGWIVVS
SEVPYQAAKNGLFPKFFAKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYNFAIVVATLAYLIPYLISTLYQFKLVI
TGETYDILPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN
>Mature_465_residues
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMF
PSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILS
QNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALVSLFGSTVGWIVVS
SEVPYQAAKNGLFPKFFAKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYNFAIVVATLAYLIPYLISTLYQFKLVI
TGETYDILPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=468, Percent_Identity=30.5555555555556, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI2367353, Length=443, Percent_Identity=30.6997742663657, Blast_Score=175, Evalue=5e-45,
Organism=Escherichia coli, GI1790575, Length=398, Percent_Identity=25.8793969849246, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1786908, Length=418, Percent_Identity=26.0765550239234, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082250, Length=471, Percent_Identity=25.0530785562633, Blast_Score=90, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71995388, Length=478, Percent_Identity=23.8493723849372, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71995382, Length=478, Percent_Identity=23.8493723849372, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50197; Mature: 50197

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
LAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFF
HHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIG
HHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCHHH
MALLALVSLFGSTVGWIVVSSEVPYQAAKNGLFPKFFAKTNKKGSPSKSLLITNVMTQIF
HHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
LFSTISGTVSEAYNFAIVVATLAYLIPYLISTLYQFKLVITGETYDILPGSRIKDGIITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHH
LAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGN
CCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
LAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFF
HHEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLQSKQILFSTNGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIG
HHHCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNR
HHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
AKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCHHH
MALLALVSLFGSTVGWIVVSSEVPYQAAKNGLFPKFFAKTNKKGSPSKSLLITNVMTQIF
HHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
LFSTISGTVSEAYNFAIVVATLAYLIPYLISTLYQFKLVITGETYDILPGSRIKDGIITT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCCCCCHHHHHHH
LAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKMN
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]