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The map label for this gene is lytR [H]

Identifier: 118476290

GI number: 118476290

Start: 630668

End: 631822

Strand: Reverse

Name: lytR [H]

Synonym: BALH_0544

Alternate gene names: 118476290

Gene position: 631822-630668 (Counterclockwise)

Preceding gene: 118476291

Following gene: 118476289

Centisome position: 12.02

GC content: 33.33

Gene sequence:

>1155_bases
TTGGGTATTTACCGGATAAATAATCAAGACATCTATTTTTTATACATGTACAATCGCTTTTATTTAGCGTACAATATTTT
TTATGTATTTAAATGCGCTTCTAGATGTATACACTTTGATAGTTTTAAAGGAGAAAAAATGATGAAATCCGATATGAACA
AAGATACTCGAGCCAAAAAAGGACGCTCAAAGAAAAAACGTCTACTTTGGTTCCTTCTTATTCCATTACTGATTATAGCA
CTTGGAGCAGGGGGATACTCCTTCCATATATACAGTAAAGCAAAATCAATTTTAAGTAATGCCTATTCTGAGCTGGGTCG
CGGAGATAAATCCAGCAAACGTGAAAAAGCCGTTAAACCTATGACTGACAACATTTCCATACTTATTATGGGTGTTGATG
AAAGTGATATTAGGGACAAGAATTATGGGAAAGCAACTCGTACAGATGCACTATTACTTGCCACAATTAATAAAAACGAT
AAATCTGTTAAACTTGTTAGTATTCCACGTGACTCACGTGTCTACATTAAATCACGTGAGAAATACGATAAAATTACACA
TGCGCACGTATTCGGTGGTGTGGACAGCACGATTGATACCGTAGAGAACTTTTTAGATGTTCCAGTTGACTACTATGTAA
AATTCAACTTTAAATCATTTATCAAAATTGTTGATTCCCTTGGTGGTATTACTGTCGATGTTCCAGTTGAATTCACAGAA
CAAAATAGTAAAGATGAGGCTGATGCAATTCACCTTAAAAAAGGACGTCAACATTTAAATGGAGAAGAAGCACTGGCACT
AGCTAGAACTCGTCATATCGATAGTGATTATATGCGAGGTCAACGTCAACAACTTGTTTTAGAAGCTATTGCTGAAAAGG
CATTATCTCTTAATTCCATTAATAAAATCGGTGGTCTATTAGACGCTGTTGATAAAGACTTAAAAACAAATTTAACTTTT
GATGATATGATGACAATTGCAAAAAATTCAATGGGTTCAAACTTAAAAATGGACAAATTGCAAGTAGAAGGTACTGATAA
ATATATAGGTGGTATTTATTATTACGTTCCAAATGAAAAAAGCGTCAATAATATATCGACAACACTACAAGAACATCTCG
GTGTTACGAATAAAAATGAACATAAAAAATTATAA

Upstream 100 bases:

>100_bases
CTTATCCCTATCTTTTGTATACAATAACGAATAGGTGTCTTATAAAATGAAACTTTAATCAGATTCGGCTATCCCTACTC
TCATTATTAGCCTTCACCAA

Downstream 100 bases:

>100_bases
TAAAAAGGCTGCTAGAACTTTCTAGACAGCCTTTTTATTATAATTTTCAACATATTTTTCATGCATATTGTGACAAAAAG
AGACAATTATTACAACAGTG

Product: LytR family transcriptional regulator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MGIYRINNQDIYFLYMYNRFYLAYNIFYVFKCASRCIHFDSFKGEKMMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIA
LGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKND
KSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTE
QNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTF
DDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL

Sequences:

>Translated_384_residues
MGIYRINNQDIYFLYMYNRFYLAYNIFYVFKCASRCIHFDSFKGEKMMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIA
LGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKND
KSVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTE
QNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTF
DDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL
>Mature_383_residues
GIYRINNQDIYFLYMYNRFYLAYNIFYVFKCASRCIHFDSFKGEKMMKSDMNKDTRAKKGRSKKKRLLWFLLIPLLIIAL
GAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKPMTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDK
SVKLVSIPRDSRVYIKSREKYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTEQ
NSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIAEKALSLNSINKIGGLLDAVDKDLKTNLTFD
DMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEKSVNNISTTLQEHLGVTNKNEHKKL

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 43720; Mature: 43589

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIYRINNQDIYFLYMYNRFYLAYNIFYVFKCASRCIHFDSFKGEKMMKSDMNKDTRAKK
CCEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCHHHHHC
GRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKP
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
MTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRE
CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCH
KYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTE
HHHHHHHHHEECCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCEEEEEEEEECC
QNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIAEKALSLNSI
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
NKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEECEEEEEECCCC
SVNNISTTLQEHLGVTNKNEHKKL
CCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GIYRINNQDIYFLYMYNRFYLAYNIFYVFKCASRCIHFDSFKGEKMMKSDMNKDTRAKK
CEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHCCCHHHHHC
GRSKKKRLLWFLLIPLLIIALGAGGYSFHIYSKAKSILSNAYSELGRGDKSSKREKAVKP
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
MTDNISILIMGVDESDIRDKNYGKATRTDALLLATINKNDKSVKLVSIPRDSRVYIKSRE
CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCH
KYDKITHAHVFGGVDSTIDTVENFLDVPVDYYVKFNFKSFIKIVDSLGGITVDVPVEFTE
HHHHHHHHHEECCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHCCCEEEEEEEEECC
QNSKDEADAIHLKKGRQHLNGEEALALARTRHIDSDYMRGQRQQLVLEAIAEKALSLNSI
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHH
NKIGGLLDAVDKDLKTNLTFDDMMTIAKNSMGSNLKMDKLQVEGTDKYIGGIYYYVPNEK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEECEEEEEECCCC
SVNNISTTLQEHLGVTNKNEHKKL
CCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA