| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118476169
Identifier: 118476169
GI number: 118476169
Start: 476553
End: 476981
Strand: Reverse
Name: 118476169
Synonym: BALH_0416
Alternate gene names: NA
Gene position: 476981-476553 (Counterclockwise)
Preceding gene: 118476170
Following gene: 118476167
Centisome position: 9.07
GC content: 38.0
Gene sequence:
>429_bases ATGAGTTCATGGCTCTTATTCGCACTATTATCAGCAATTGCTGCTGCCCTTGTATCTATTTTCGGAAAGATTGGTTTAGA TGGAATCGATGCCAATGTCGCGACAACGGTTCGTTCTATTATTATGGCATTATTTATGGTAGGCGTTATTATTATACAAG GTAAATTTCAAAATATTGGCGACGTACTGCTAAATAAAAAAGCACTGCTCTTTATCACATTAAGTGGGGTTGCAGGTGCT TCGTCATGGCTATTTTATTTTCTTGCCCTCAAAACAGGGAAAGTTTCACAAGTGGCTCCAGTCGATAAATTAAGCGTCGT ATTTTCTATCATCCTCGCTATGATTATACTCGGTGAGAAGTTAAACTTTATGACTGGCATTGGTGTAGTCTTTATTACAG CTGGTGTACTATTTATCGCTTTCAGCTAA
Upstream 100 bases:
>100_bases CCGCTATTTGCAAGGCGGTAAAATCCCACTGATTAAAGTTTCACTTTATACATGAGAATGGTTTTCATGTATAATAATGT AAGATTGGAGGAATTTTACT
Downstream 100 bases:
>100_bases AAAAACCGCTACTCGCGGTTTTTCTTTTTCTTTATGTAAAACCATACGACACATGTAACAACTACTGAAATGGATATAAT CCATATTCCATAATGATGTA
Product: DMT family permease
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSSWLLFALLSAIAAALVSIFGKIGLDGIDANVATTVRSIIMALFMVGVIIIQGKFQNIGDVLLNKKALLFITLSGVAGA SSWLFYFLALKTGKVSQVAPVDKLSVVFSIILAMIILGEKLNFMTGIGVVFITAGVLFIAFS
Sequences:
>Translated_142_residues MSSWLLFALLSAIAAALVSIFGKIGLDGIDANVATTVRSIIMALFMVGVIIIQGKFQNIGDVLLNKKALLFITLSGVAGA SSWLFYFLALKTGKVSQVAPVDKLSVVFSIILAMIILGEKLNFMTGIGVVFITAGVLFIAFS >Mature_141_residues SSWLLFALLSAIAAALVSIFGKIGLDGIDANVATTVRSIIMALFMVGVIIIQGKFQNIGDVLLNKKALLFITLSGVAGAS SWLFYFLALKTGKVSQVAPVDKLSVVFSIILAMIILGEKLNFMTGIGVVFITAGVLFIAFS
Specific function: Unknown
COG id: COG2510
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 15002; Mature: 14871
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSWLLFALLSAIAAALVSIFGKIGLDGIDANVATTVRSIIMALFMVGVIIIQGKFQNIG CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DVLLNKKALLFITLSGVAGASSWLFYFLALKTGKVSQVAPVDKLSVVFSIILAMIILGEK HHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCH LNFMTGIGVVFITAGVLFIAFS HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSWLLFALLSAIAAALVSIFGKIGLDGIDANVATTVRSIIMALFMVGVIIIQGKFQNIG CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DVLLNKKALLFITLSGVAGASSWLFYFLALKTGKVSQVAPVDKLSVVFSIILAMIILGEK HHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCH LNFMTGIGVVFITAGVLFIAFS HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1655697 [H]