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The map label for this gene is yxkH [H]

Identifier: 118476078

GI number: 118476078

Start: 369048

End: 370130

Strand: Reverse

Name: yxkH [H]

Synonym: BALH_0321

Alternate gene names: 118476078

Gene position: 370130-369048 (Counterclockwise)

Preceding gene: 118476079

Following gene: 118476077

Centisome position: 7.04

GC content: 35.46

Gene sequence:

>1083_bases
ATGAGAAAATACGCAGCAATCGCTTTATGTACATCTGCCATTCTAGCAGGCTGTAATACTAGCAATGTAAGCCAGGAACC
TAACAAAGAGAGAAAGGTTCAAGAAACTAAGAAACAAGCAGAGACTGTGCAAGAACAAGGTAAAATTTCTTATAACCCAA
TTACACACGAATCTACAAATACTACTATTCATATGACAGATATAAAAGATACTTTAACTGAGGTACAATATAAAATTTGG
CGTACCGCTGATGGAAAGGAAACTGCTAAATCTTTGTCTTCTAAAGAAAAGGAAAAGCAATTTTCACTTCCTTTTGACAT
AAAGGAATTTGAAGGAAAACGCGGTGAGTTCCAAATTGAAGCAATAGGCATAAAAGAAGATGGGAAAACCATTCCACTCA
CAAAATCTGCTATTACTTTCGAGCAAAAGGTTCCCGTTCTTATGTACCATGCAATCGATGATTATCACGGTCAAGGTATT
AAAGACTTATTCGTATCACCCGCTAACTTTGAAGCCCAAATGAAATATTTAAAGGACAATGGTTATACACTGTTAACGTT
TGAACGCTGGGGCGATATAAATAAAGTAAATAAACCTATCTTTGTTACATTTGATGATGGTATGAAAAATAATATGAATG
CATTTCATGTTTTACAAAAGCTAAAAGACGATACGTTTAAACCGGCGGCAACAGAATATATGATTGTTAATAATGTTGAT
GCTGAAGGATCTCTTTCTACATCTGACATAAAAGAAATGGTGGATTCCGGCATTTTCTCTATGCAATCTCATACTGCAAC
ACATGCGGACTTGCCGAAGATTACAAACTATGAAGAAGAATTAAAGGAATCGAAAGAAAAGCTAGAAAAAATAACAGGTA
AACCCGTTATCGCAGTTGCTTATCCATTCGGTCACGTAGATGATAAAGTCGTTGCAGAAACGAAAAAATATTATCAATTC
GCAACAACAACAAAACCTGGAAAATTCATTACAAAAGGTGAACCCGATGAGTTGTTAAAAATGAAGCGCGTTCGCATACA
CCATACGACGACCGTAGAACAATTTGCTTCTTCGATTAAATAA

Upstream 100 bases:

>100_bases
TAAAATGACATGATGAACAAGGGTATATCCCCACCTCTCTTACAGCGGTGGGGATTTTAAATAGAAGTACGAAACATAAT
ACACAATAGAAGGTGATTTT

Downstream 100 bases:

>100_bases
CGATGAGAGCTCAATATATTTTGAGCTCTCTTTTTATGCTATATTTATATATATTTTTTGAATTTTCTTGTATTATATAT
AGTAAGAAATCTTTCAAATT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW
RTADGKETAKSLSSKEKEKQFSLPFDIKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVNNVD
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK

Sequences:

>Translated_360_residues
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW
RTADGKETAKSLSSKEKEKQFSLPFDIKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVNNVD
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
>Mature_360_residues
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIW
RTADGKETAKSLSSKEKEKQFSLPFDIKEFEGKRGEFQIEAIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGI
KDLFVSPANFEAQMKYLKDNGYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVNNVD
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVAYPFGHVDDKVVAETKKYYQF
ATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 40776; Mature: 40776

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
TTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFSLPFDIKEFEGKRGEFQIE
CEEEEECHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEE
AIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN
EEEEECCCCCCCCCHHHEEHHCCCCEEEEEEHHHHCCCCHHHHHCCCCCHHHHHHEEECC
GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVNNVD
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEECHHHHHHHHHHCC
>Mature Secondary Structure
MRKYAAIALCTSAILAGCNTSNVSQEPNKERKVQETKKQAETVQEQGKISYNPITHESTN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
TTIHMTDIKDTLTEVQYKIWRTADGKETAKSLSSKEKEKQFSLPFDIKEFEGKRGEFQIE
CEEEEECHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEE
AIGIKEDGKTIPLTKSAITFEQKVPVLMYHAIDDYHGQGIKDLFVSPANFEAQMKYLKDN
EEEEECCCCCCCCCHHHEEHHCCCCEEEEEEHHHHCCCCHHHHHCCCCCHHHHHHEEECC
GYTLLTFERWGDINKVNKPIFVTFDDGMKNNMNAFHVLQKLKDDTFKPAATEYMIVNNVD
CCEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCC
AEGSLSTSDIKEMVDSGIFSMQSHTATHADLPKITNYEEELKESKEKLEKITGKPVIAVA
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
YPFGHVDDKVVAETKKYYQFATTTKPGKFITKGEPDELLKMKRVRIHHTTTVEQFASSIK
ECCCCCCCHHHHHHHHHHEEECCCCCCCEEECCCHHHHHHHHHHHEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]