Click here to switch to the map view.

The map label for this gene is yddQ [H]

Identifier: 118476059

GI number: 118476059

Start: 349230

End: 349823

Strand: Reverse

Name: yddQ [H]

Synonym: BALH_0302

Alternate gene names: 118476059

Gene position: 349823-349230 (Counterclockwise)

Preceding gene: 118476065

Following gene: 118476052

Centisome position: 6.65

GC content: 35.86

Gene sequence:

>594_bases
TTGAATATGAAATTGGAGGAAGATAAATATATGAAAACAGCTCTTTTACTCGTTGATATTCAAAATGATTATTTTCCACA
CGGAAAGATGGAATTACGTAATCCAGCAGAAGCAAGCGCATATGCCAGCCAACTACTACAGCTCTTTAGAAAGAAAAACG
AACCTATTTTTCATATCCAACATATATCAATAAAAGAGGACGCAACTTTTTTCCTACCCAATACAGAAGGTGTACATATT
CATGAAAGCGTACGCCCACTTAGAGAAGAATCAGTTATACTCAAGCATTATCCAAATAGTTTTCGCGAAACTGATCTTCT
AAAACAATTACAACGTTTAGCTATTGAGCACGTCGTCATATGCGGGATGATGACTCATATGTGTATTGATGCTACCGTAA
GGGCTGCCTTTGATTTCGGCTTGCAATGTACTGTTATACATGATGCTTGTGCTACAAAAGACCTTTCTTTTAAGAATGCT
ACTATACCAGCCGTTTATATTCATAACACAATTTTAGCTAGTTTAAACGGCGTATATGCAAATGTAATGAGTACAGAGGA
GTTTTTAGCTACAAAAAAACACTCTCTTCAGTGA

Upstream 100 bases:

>100_bases
AAAAATTCAATAGAAAATAGTAACCTTTAAAGTTATGTAAAATTCTCCTCTTGCATATTTTTTAAAAGGATAATCTTCTC
TACTAATTGAATACCATTAT

Downstream 100 bases:

>100_bases
GCAAAACCGAAAAGAGTGTTTCTTGTCAAACCATAGATTTTCTTTCAAATTGTATTATACAGGAAATCCTTAAAATGAAT
ACAAAAAAATGTGACTAATA

Product: isochorismatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MNMKLEEDKYMKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFLPNTEGVHI
HESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNA
TIPAVYIHNTILASLNGVYANVMSTEEFLATKKHSLQ

Sequences:

>Translated_197_residues
MNMKLEEDKYMKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFLPNTEGVHI
HESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNA
TIPAVYIHNTILASLNGVYANVMSTEEFLATKKHSLQ
>Mature_197_residues
MNMKLEEDKYMKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFLPNTEGVHI
HESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNA
TIPAVYIHNTILASLNGVYANVMSTEEFLATKKHSLQ

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 22517; Mature: 22517

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKLEEDKYMKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQ
CCCCCCHHHHHEEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE
HISIKEDATFFLPNTEGVHIHESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVI
EEEECCCCEEEECCCCCEEEHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
CGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNTILASLNGVYA
HHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
NVMSTEEFLATKKHSLQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNMKLEEDKYMKTALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQ
CCCCCCHHHHHEEEEEEEEECCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEE
HISIKEDATFFLPNTEGVHIHESVRPLREESVILKHYPNSFRETDLLKQLQRLAIEHVVI
EEEECCCCEEEECCCCCEEEHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHH
CGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATIPAVYIHNTILASLNGVYA
HHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
NVMSTEEFLATKKHSLQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]