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The map label for this gene is oppA [H]

Identifier: 118475959

GI number: 118475959

Start: 201742

End: 203514

Strand: Reverse

Name: oppA [H]

Synonym: BALH_0194

Alternate gene names: 118475959

Gene position: 203514-201742 (Counterclockwise)

Preceding gene: 118475960

Following gene: 118475955

Centisome position: 3.87

GC content: 36.38

Gene sequence:

>1773_bases
ATGTATATACATATAGAACACCTGATTACCTACATGTACACATTTATAATAGGTTTTCTCTTCTTCTATAAATACACTTT
AAGACATGGACATTATGACGTTACGAACAACACATTTAGGGAGGAACGAACAATGAAGAAAAAAGTTGTACCTGTTGTTG
CATCTGTTTTAGGGGCAAGTCTATTACTAACTGCTTGCGGGGGAAATAAAGATAATGCAAGCGGAGCGAAAGCAAATGAT
AAAGCACCTGATAAACAGGCAATTAACTTATCATTCGCTTCAGAAATTCCAACGATGGATGTTGCGAAAGCGACAGATGG
GGAATCCATGAACGTAATGCGAAATGTTTTTGAAGGTTTATATGCAATGGGAGAAGATAATAAACCGATTCCTGGTGTTG
CTGAGTCAGTTGACGTTAGTCCTGATAAAGCAAAATATACATTCCACCTGCGTGATTCAAAATGGTCAAACGGTACTCCT
GTTACAGCAAAGGATTTCGTCTTCGCTTGGCAACGTGCCGTAAACCCTGATACAGCAGCTGAATATGCATTCTTATTCTT
CGATATAAAGAATGCGAAACAAATAAACCAAAAACAATTACCGGTTGATCAATTAGGTATTAAAGCTGTTGATGATAAAA
CGTTAGAAGTACAACTAGATCGTCCTGTTCCCTACTTCTTAAGCTTAACGACATTCTCAACATTCTTGCCAATTAATGAA
GAGTACTTAAAGTCTCAAGGCGATAAATACGGTTTAGAAACAAATCATTTAATTTACAACGGTGCTTTCACATTAGATAA
CTGGAAACATGAGCAAAGCTTCCAATTGAAGAAGAATCCTAACTATTGGGATGCTAAAACTGTAAAATTAGAAGAAATCA
ACTTCAATGTCGTTAAAGATAAGTCTACAGAAGTGAACTTATATGATTCAGGACAAATTGATCGCGTTGCTTTAACTGCG
GAGTTTGTTGATAAATATAAAGACGATCCAAACTTCAAAGAACGCGCTGAAGTTGGCATTCAATTTTTACGACTCAATCA
AAAAAATGAAACATTAAAAAATCAGCATGCGCGCCTTGCTATTAACGGCGCAATGAATAAAAAAGCCTACGTAGAAACAA
TTTTAAATAACGGCGCTGTTCCAGCTGAAGGAATGATTCCTGCGAAATTTGCAAAAAGTCCTGATGGCAACGACTTCCGT
AAAGAAAATGGCAATCTAGTCAAGGATGATGTGAAAACAGCGAAAGAAAACTGGAAAAAAGCGAAGCAAGAACTTGGTAC
TGACAAAGTAACAATTGAACTCTTAACAAGTGATAATGCTTTAGCTAAAAAAACTGGTGAATATTTAAAAGGTGAACTAG
AAAAGAACTTAGATGGATTAACAGTGAATTTAAAACCACAACCACGTAAACAACAGTTAAAACTACTATTAAGTGGTGAC
TACGAAATCGGTATTGATGGCTGGGGCCCTGACTTCGCTGATCCAATTACATTCTTAGATTTATTTACAACAGATAGTGC
TTACAACTTCGATAAATACTCTAACAAAGAGTACGATGAGCTAATTCATAAAGTAAAAACAGATTTAGCTGGTGATGAAA
AGGCACGGTTTGAAGCAATGAAGCAAGCTGAAAAAATTCTATTACAAGACGGTGCTGTCGCTCCTTTATACCAACAAGGT
CGTTCTTACTTACAACGCTCTTTCATTAAAGGACTTGTAACAACTGACTTCGGTGGTGAGTTTAACTACAAGTGGACAGA
AGTTGCAAAATAA

Upstream 100 bases:

>100_bases
CCAGTGTTAATATTCTAAATAATCAAAGAAACAAAATATTTCACCATCGGAATATAACGTCTACTACGTTGAAACATATA
ACGATAGATTATAGTTCAAC

Downstream 100 bases:

>100_bases
TAAGTGCTAATAAAAAGGTATCCCACCGAGGATACCTTTTTATTTTATGCTTCTTTAACTACAGAGCTTCTCCCCTTTAC
TATTCCTTTTATAGCTAAAG

Product: oligopeptide transporter, periplasmic-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MYIHIEHLITYMYTFIIGFLFFYKYTLRHGHYDVTNNTFREERTMKKKVVPVVASVLGASLLLTACGGNKDNASGAKAND
KAPDKQAINLSFASEIPTMDVAKATDGESMNVMRNVFEGLYAMGEDNKPIPGVAESVDVSPDKAKYTFHLRDSKWSNGTP
VTAKDFVFAWQRAVNPDTAAEYAFLFFDIKNAKQINQKQLPVDQLGIKAVDDKTLEVQLDRPVPYFLSLTTFSTFLPINE
EYLKSQGDKYGLETNHLIYNGAFTLDNWKHEQSFQLKKNPNYWDAKTVKLEEINFNVVKDKSTEVNLYDSGQIDRVALTA
EFVDKYKDDPNFKERAEVGIQFLRLNQKNETLKNQHARLAINGAMNKKAYVETILNNGAVPAEGMIPAKFAKSPDGNDFR
KENGNLVKDDVKTAKENWKKAKQELGTDKVTIELLTSDNALAKKTGEYLKGELEKNLDGLTVNLKPQPRKQQLKLLLSGD
YEIGIDGWGPDFADPITFLDLFTTDSAYNFDKYSNKEYDELIHKVKTDLAGDEKARFEAMKQAEKILLQDGAVAPLYQQG
RSYLQRSFIKGLVTTDFGGEFNYKWTEVAK

Sequences:

>Translated_590_residues
MYIHIEHLITYMYTFIIGFLFFYKYTLRHGHYDVTNNTFREERTMKKKVVPVVASVLGASLLLTACGGNKDNASGAKAND
KAPDKQAINLSFASEIPTMDVAKATDGESMNVMRNVFEGLYAMGEDNKPIPGVAESVDVSPDKAKYTFHLRDSKWSNGTP
VTAKDFVFAWQRAVNPDTAAEYAFLFFDIKNAKQINQKQLPVDQLGIKAVDDKTLEVQLDRPVPYFLSLTTFSTFLPINE
EYLKSQGDKYGLETNHLIYNGAFTLDNWKHEQSFQLKKNPNYWDAKTVKLEEINFNVVKDKSTEVNLYDSGQIDRVALTA
EFVDKYKDDPNFKERAEVGIQFLRLNQKNETLKNQHARLAINGAMNKKAYVETILNNGAVPAEGMIPAKFAKSPDGNDFR
KENGNLVKDDVKTAKENWKKAKQELGTDKVTIELLTSDNALAKKTGEYLKGELEKNLDGLTVNLKPQPRKQQLKLLLSGD
YEIGIDGWGPDFADPITFLDLFTTDSAYNFDKYSNKEYDELIHKVKTDLAGDEKARFEAMKQAEKILLQDGAVAPLYQQG
RSYLQRSFIKGLVTTDFGGEFNYKWTEVAK
>Mature_590_residues
MYIHIEHLITYMYTFIIGFLFFYKYTLRHGHYDVTNNTFREERTMKKKVVPVVASVLGASLLLTACGGNKDNASGAKAND
KAPDKQAINLSFASEIPTMDVAKATDGESMNVMRNVFEGLYAMGEDNKPIPGVAESVDVSPDKAKYTFHLRDSKWSNGTP
VTAKDFVFAWQRAVNPDTAAEYAFLFFDIKNAKQINQKQLPVDQLGIKAVDDKTLEVQLDRPVPYFLSLTTFSTFLPINE
EYLKSQGDKYGLETNHLIYNGAFTLDNWKHEQSFQLKKNPNYWDAKTVKLEEINFNVVKDKSTEVNLYDSGQIDRVALTA
EFVDKYKDDPNFKERAEVGIQFLRLNQKNETLKNQHARLAINGAMNKKAYVETILNNGAVPAEGMIPAKFAKSPDGNDFR
KENGNLVKDDVKTAKENWKKAKQELGTDKVTIELLTSDNALAKKTGEYLKGELEKNLDGLTVNLKPQPRKQQLKLLLSGD
YEIGIDGWGPDFADPITFLDLFTTDSAYNFDKYSNKEYDELIHKVKTDLAGDEKARFEAMKQAEKILLQDGAVAPLYQQG
RSYLQRSFIKGLVTTDFGGEFNYKWTEVAK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=544, Percent_Identity=30.8823529411765, Blast_Score=229, Evalue=4e-61,
Organism=Escherichia coli, GI87081878, Length=516, Percent_Identity=30.6201550387597, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1789397, Length=505, Percent_Identity=27.7227722772277, Blast_Score=195, Evalue=8e-51,
Organism=Escherichia coli, GI1787762, Length=453, Percent_Identity=25.8278145695364, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787551, Length=500, Percent_Identity=22.6, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789966, Length=470, Percent_Identity=23.8297872340426, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1787052, Length=488, Percent_Identity=23.155737704918, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1789887, Length=500, Percent_Identity=24.2, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 66770; Mature: 66770

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIHIEHLITYMYTFIIGFLFFYKYTLRHGHYDVTNNTFREERTMKKKVVPVVASVLGAS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLTACGGNKDNASGAKANDKAPDKQAINLSFASEIPTMDVAKATDGESMNVMRNVFEGL
HEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCEEECCCCCCHHHHHHHHHHHH
YAMGEDNKPIPGVAESVDVSPDKAKYTFHLRDSKWSNGTPVTAKDFVFAWQRAVNPDTAA
HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHH
EYAFLFFDIKNAKQINQKQLPVDQLGIKAVDDKTLEVQLDRPVPYFLSLTTFSTFLPINE
CEEEEEEEECCHHHHHHHCCCHHHHCCEEECCCEEEEEECCCCCCEEEHHHHHHHCCCCH
EYLKSQGDKYGLETNHLIYNGAFTLDNWKHEQSFQLKKNPNYWDAKTVKLEEINFNVVKD
HHHHCCCCCCCCCCCEEEEECEEEECCCCCCCCEEECCCCCCCCCEEEEEEECCEEEEEC
KSTEVNLYDSGQIDRVALTAEFVDKYKDDPNFKERAEVGIQFLRLNQKNETLKNQHARLA
CCCEEEEECCCCCCEEEEEHHHHHHHCCCCCHHHHHHHCEEEEEECCCCHHHHCCCCEEE
INGAMNKKAYVETILNNGAVPAEGMIPAKFAKSPDGNDFRKENGNLVKDDVKTAKENWKK
EECCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCEEHHHHHHHHHHHHH
AKQELGTDKVTIELLTSDNALAKKTGEYLKGELEKNLDGLTVNLKPQPRKQQLKLLLSGD
HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHEEEEECC
YEIGIDGWGPDFADPITFLDLFTTDSAYNFDKYSNKEYDELIHKVKTDLAGDEKARFEAM
EEEECCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
KQAEKILLQDGAVAPLYQQGRSYLQRSFIKGLVTTDFGGEFNYKWTEVAK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCCCC
>Mature Secondary Structure
MYIHIEHLITYMYTFIIGFLFFYKYTLRHGHYDVTNNTFREERTMKKKVVPVVASVLGAS
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LLLTACGGNKDNASGAKANDKAPDKQAINLSFASEIPTMDVAKATDGESMNVMRNVFEGL
HEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCCCCEEECCCCCCHHHHHHHHHHHH
YAMGEDNKPIPGVAESVDVSPDKAKYTFHLRDSKWSNGTPVTAKDFVFAWQRAVNPDTAA
HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHH
EYAFLFFDIKNAKQINQKQLPVDQLGIKAVDDKTLEVQLDRPVPYFLSLTTFSTFLPINE
CEEEEEEEECCHHHHHHHCCCHHHHCCEEECCCEEEEEECCCCCCEEEHHHHHHHCCCCH
EYLKSQGDKYGLETNHLIYNGAFTLDNWKHEQSFQLKKNPNYWDAKTVKLEEINFNVVKD
HHHHCCCCCCCCCCCEEEEECEEEECCCCCCCCEEECCCCCCCCCEEEEEEECCEEEEEC
KSTEVNLYDSGQIDRVALTAEFVDKYKDDPNFKERAEVGIQFLRLNQKNETLKNQHARLA
CCCEEEEECCCCCCEEEEEHHHHHHHCCCCCHHHHHHHCEEEEEECCCCHHHHCCCCEEE
INGAMNKKAYVETILNNGAVPAEGMIPAKFAKSPDGNDFRKENGNLVKDDVKTAKENWKK
EECCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCEEHHHHHHHHHHHHH
AKQELGTDKVTIELLTSDNALAKKTGEYLKGELEKNLDGLTVNLKPQPRKQQLKLLLSGD
HHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHEEEEECC
YEIGIDGWGPDFADPITFLDLFTTDSAYNFDKYSNKEYDELIHKVKTDLAGDEKARFEAM
EEEECCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
KQAEKILLQDGAVAPLYQQGRSYLQRSFIKGLVTTDFGGEFNYKWTEVAK
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]