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The map label for this gene is spoVT [H]

Identifier: 118475825

GI number: 118475825

Start: 58201

End: 58737

Strand: Direct

Name: spoVT [H]

Synonym: BALH_0049

Alternate gene names: 118475825

Gene position: 58201-58737 (Clockwise)

Preceding gene: 118475824

Following gene: 118475826

Centisome position: 1.11

GC content: 36.31

Gene sequence:

>537_bases
ATGAAAGCAACTGGAATCGTACGTCGAATTGATGATTTAGGTAGGGTAGTAATTCCAAAGGAAATTCGTAGAACTTTACG
TATTCGAGAAGGGGACCCATTAGAAATATTTGTTGATCGCGATGGAGAAGTAATTTTAAAGAAATATTCTCCAATTAGCG
AACTAGGTGATTTTGCAAAAGAATATGCGGATGCTTTATATGATAGCTTAGGACATAATGTGCTTGTCTGCGATCGAGAT
TCTATTATCGCAGTATCAGGCGTATCAAAAAAAGAATACTTAAATAAAAGCGTTGGCGATCTAATTGAAAAAACGATGGA
AGAAAGAAAGTCTGTTATTATGACGGACGAAAGTGATGTTTCCATTATTGATGGTGTAACAGAAAAGGTTCATTCTTATA
CAGTTGGACCGATTGTTGCAAATGGAGACCCAATTGGAGCTGTCATTATTTTTTCAAAAGAAGCGATTATAAGCGAAATA
GAGCACAAAGCGGTCAATACTGCTGCCAGTTTCTTAGCGAAACAAATGGAACAGTAA

Upstream 100 bases:

>100_bases
GAACTAATGTGTAAAATACTATGTCTAACAGTTGGTGATTTTTACATGAACAGGTAAATTCACCACTTTCATCATCAGTA
GAAAGTGAGGCAGCATTAGA

Downstream 100 bases:

>100_bases
AGGTGTATAATTTTAGAAGTAGCAATCTTTCCTAATTATGATATTTCTTCTTGAGAAATCAATTATTTGGAGATATATGT
ATATTGAATGAAGGTAGCGC

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHNVLVCDRD
SIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI
EHKAVNTAASFLAKQMEQ

Sequences:

>Translated_178_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHNVLVCDRD
SIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI
EHKAVNTAASFLAKQMEQ
>Mature_178_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHNVLVCDRD
SIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDVSIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEI
EHKAVNTAASFLAKQMEQ

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 19679; Mature: 19679

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAK
CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYADALYDSLGHNVLVCDRDSIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDV
HHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCC
SIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEIEHKAVNTAASFLAKQMEQ
HHHHHHHHHHHCEECCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAK
CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYADALYDSLGHNVLVCDRDSIIAVSGVSKKEYLNKSVGDLIEKTMEERKSVIMTDESDV
HHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCC
SIIDGVTEKVHSYTVGPIVANGDPIGAVIIFSKEAIISEIEHKAVNTAASFLAKQMEQ
HHHHHHHHHHHCEECCCEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]