| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117922059
Identifier: 117922059
GI number: 117922059
Start: 4350651
End: 4351577
Strand: Direct
Name: 117922059
Synonym: Shewana3_3623
Alternate gene names: NA
Gene position: 4350651-4351577 (Clockwise)
Preceding gene: 117922058
Following gene: 117922061
Centisome position: 87.5
GC content: 35.06
Gene sequence:
>927_bases ATGAGCAAAAAAATATATAAATATATTGGTCCTAAAATTTTAGAGCAGGCCTTTTATAGACAAGGTTTCTGTCGTGTGAA GTGCTCTTATCCAAAAGATTATAATGATCCATATGAACTATTTCTGACTGTAGATTTTAATGATGAACCTGAAGTGCTGG CTTTTTATAATGAAGTAATTGAAGAGATACCACAGTATCCTACATCTTGTTTTTCTAACTCTCCTATTGTAACTCCAATG TGGGCCCATTATGGACAAAACTCTCAAGGTTTTGTAATCGAATTTGATGAAAATAAAATTTTAAAAGCAATAGAAAATGC TCGAATAGACGATGTCGATTATAAAGATAAGCCTAGCGAAGAATTATCCAATCTTTTACATCGTGCTTGTTTTATTGGAA AACCAAGGTACACCATGTTTCTATGGAGAGGTGTCCTAAGTTCAGCGTATTTTACAAAAAACTCATGTTGGAGCTACGAG TTAGAGAGAAGACTTGTTGTAAAAAATGAGGATATTGAAAATATTGGTGGTCTCATGATCCTAAATATTCCTATCGACTG CGTATCAGCCATCATTGCTGGCTCTAAAGCAGAACAGGAATACCTTGAAAAGTGTAGAGATTTATCTGATTCACTTAATA TCCCTTACTTTCAAACGACTATAGGGAAAAGCTCATCAACACCATATTTACTTACCAAAGACTCCAAAAGTTTCATCTTC GATAGCGATAAAATTCGCCCCGCGTCTCATGCATGTAAAAACTGCAGGGAACCAATTATTGCAGATAAGGAAATGTGCTC ATGGTGTTGTATTACAGAATATCATCAGCAAAATGCAGCATACCGAAATCCGATGAGAGCATTAGACCATGCTGGGATAT TAGAGCAATATGTCAGATCATTTCCTAACATAACAAAAAAATCTTAG
Upstream 100 bases:
>100_bases ATGGTTGATAACAACCTACAACAATGATAATTTCCATTTATTTTAAAAATATTTTTTATTCTCTTAATAAAATACGTTTC TCATCAATCTAAGTAATGAA
Downstream 100 bases:
>100_bases TGATATAGAACATCACTATCTTAGAACAATATTTCTAGAATCCTAAAACCTTACTTATCGGAAAATTTTACTGTTTATCG TAGAATTTATAGTTACATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSKKIYKYIGPKILEQAFYRQGFCRVKCSYPKDYNDPYELFLTVDFNDEPEVLAFYNEVIEEIPQYPTSCFSNSPIVTPM WAHYGQNSQGFVIEFDENKILKAIENARIDDVDYKDKPSEELSNLLHRACFIGKPRYTMFLWRGVLSSAYFTKNSCWSYE LERRLVVKNEDIENIGGLMILNIPIDCVSAIIAGSKAEQEYLEKCRDLSDSLNIPYFQTTIGKSSSTPYLLTKDSKSFIF DSDKIRPASHACKNCREPIIADKEMCSWCCITEYHQQNAAYRNPMRALDHAGILEQYVRSFPNITKKS
Sequences:
>Translated_308_residues MSKKIYKYIGPKILEQAFYRQGFCRVKCSYPKDYNDPYELFLTVDFNDEPEVLAFYNEVIEEIPQYPTSCFSNSPIVTPM WAHYGQNSQGFVIEFDENKILKAIENARIDDVDYKDKPSEELSNLLHRACFIGKPRYTMFLWRGVLSSAYFTKNSCWSYE LERRLVVKNEDIENIGGLMILNIPIDCVSAIIAGSKAEQEYLEKCRDLSDSLNIPYFQTTIGKSSSTPYLLTKDSKSFIF DSDKIRPASHACKNCREPIIADKEMCSWCCITEYHQQNAAYRNPMRALDHAGILEQYVRSFPNITKKS >Mature_307_residues SKKIYKYIGPKILEQAFYRQGFCRVKCSYPKDYNDPYELFLTVDFNDEPEVLAFYNEVIEEIPQYPTSCFSNSPIVTPMW AHYGQNSQGFVIEFDENKILKAIENARIDDVDYKDKPSEELSNLLHRACFIGKPRYTMFLWRGVLSSAYFTKNSCWSYEL ERRLVVKNEDIENIGGLMILNIPIDCVSAIIAGSKAEQEYLEKCRDLSDSLNIPYFQTTIGKSSSTPYLLTKDSKSFIFD SDKIRPASHACKNCREPIIADKEMCSWCCITEYHQQNAAYRNPMRALDHAGILEQYVRSFPNITKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35663; Mature: 35532
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIYKYIGPKILEQAFYRQGFCRVKCSYPKDYNDPYELFLTVDFNDEPEVLAFYNEVI CCCHHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH EEIPQYPTSCFSNSPIVTPMWAHYGQNSQGFVIEFDENKILKAIENARIDDVDYKDKPSE HHHHCCCHHHHCCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCHH ELSNLLHRACFIGKPRYTMFLWRGVLSSAYFTKNSCWSYELERRLVVKNEDIENIGGLMI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEECCCCHHHCCCEEE LNIPIDCVSAIIAGSKAEQEYLEKCRDLSDSLNIPYFQTTIGKSSSTPYLLTKDSKSFIF EECCHHHHHHHHCCCCHHHHHHHHHHCHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEE DSDKIRPASHACKNCREPIIADKEMCSWCCITEYHQQNAAYRNPMRALDHAGILEQYVRS CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHH FPNITKKS CCCCCCCC >Mature Secondary Structure SKKIYKYIGPKILEQAFYRQGFCRVKCSYPKDYNDPYELFLTVDFNDEPEVLAFYNEVI CCHHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH EEIPQYPTSCFSNSPIVTPMWAHYGQNSQGFVIEFDENKILKAIENARIDDVDYKDKPSE HHHHCCCHHHHCCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCHH ELSNLLHRACFIGKPRYTMFLWRGVLSSAYFTKNSCWSYELERRLVVKNEDIENIGGLMI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEECCCCHHHCCCEEE LNIPIDCVSAIIAGSKAEQEYLEKCRDLSDSLNIPYFQTTIGKSSSTPYLLTKDSKSFIF EECCHHHHHHHHCCCCHHHHHHHHHHCHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEE DSDKIRPASHACKNCREPIIADKEMCSWCCITEYHQQNAAYRNPMRALDHAGILEQYVRS CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHH FPNITKKS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA