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The map label for this gene is mltD [H]

Identifier: 117922020

GI number: 117922020

Start: 4300980

End: 4302404

Strand: Direct

Name: mltD [H]

Synonym: Shewana3_3584

Alternate gene names: 117922020

Gene position: 4300980-4302404 (Clockwise)

Preceding gene: 117922015

Following gene: 117922028

Centisome position: 86.5

GC content: 50.32

Gene sequence:

>1425_bases
ATGCGGAAAACCTTTCGCCAACCCCATGCCTTAGCTGCGCTCGTGGTCGCCATCTTGATGGGCCAGCTAAGCGGCTGCGC
AACCACGTCGGCGCAAACGTCGCCTACGGAATACGCTGCAACCTTGCCTGACGCCCAGGGCAATAGTGAAGAGACAGCAC
AACCTCAGCATTTTGAAACGGAAGTTATCGACGAGCGTTACGCCGATGTGTGGGAAAAAATTCAACACGCCCGCACCATT
GATGTGCATGACGATGCCGAAGTCCGCAAACAGCGTAACTTTTTCGATGATAAGCAAAAGTTTATGACTCAGGTGACCCA
GCGCGCCGAGCCATTTTTATACTATATTGTCAGCCAACTCGAAGCCCGCAACATGCCGCTCGAACTGGCACTCCTGCCGA
TTGTTGAGAGTGGTTATAACCCGCTAGCTCAGGCAAATGGCCCCGCAGGGCTCTGGCAAATGATCCCTGCGACGGGACGT
AATTTTGGCCTGACCATCAACTCGGCCTACGATGGCCGTAAAGATGCACTGGCCTCGACCGATGCCGTGCTCGACTATTT
ACAACACTTGCATGACACCTTAGGTAACGACTGGATCAACGCCGTTGCGGGTTATAACAGTGGCGAGCTAGTGATCAAAG
CCGCTATCGATAGAAACAAAGCTAAAGGCAAACCCACGGATTTCTGGTCGCTGAATATTCCGGCTCGCCAAGTGCAAACC
GTGCCTAAATGGCTGGCCTTTATTCAAATTATCCGCGCACCTAGCCATTACAATCTCAAGGTGATGCCGATTGCCAACCG
CCCATTTTTGGAGCGTTTACCTGCACCTAACGGGGTTGAACTCAGCCAAATCGCCAATGCTGCGGGACTCACTAAGGCGG
AGTTTAAAACCTATAACCCTGGTTATCGCCAAAGCGTGATCCCAAGTAAGGGCAAATACCAAATCGCCCTGCCGATTGAA
AACATCGGCCAATATCAAGAAAATCAGCACCAGTTGTCCGCGCAAACACGTTACGACAGCCAGAGCTATATTGTGAAATC
CGGCGATAGCCTAGGCACAATTGCCGCGAAATTTGATATCTCAGTCAAAGAGTTAAAGCAGGCAAATAACCTCAACTCCG
ATAGAATCAAAATCGGCCAAGAGTTGACCCTGTTAACGCCGATGAGCAGCGAAGATAACACCTCGACCGAGACGCCAAAG
CAGAGCAAAGCTCAAACAACGTCTCAAGCGGCAAAGGCTAAAACCAGCAGTAAAACCGCTGACAAGCCCACCGCGAAAGC
CAGTACTTACAAGGTGAAGTCCGGTGACTCGTTAGATAAAATCGCGCGTAAAAACAAAGTGAAACTCGCGGATTTAATGA
AATGGAACCAGCTGAATGCCAAGAGCATTATTAAGTCTGGCCAAGAGCTAAAACTGTCGGAATAA

Upstream 100 bases:

>100_bases
AACGCGGTCAAATTTTAAGCAAAGCTATTCACAAATGCGAAAACAGATTAGCATGTGCCAAATCATGGAATACCAAGTCA
TCACAGATTACAGGACAATC

Downstream 100 bases:

>100_bases
AGACGGCTAAGACGAAAAAGCACTACCAAGGTAGTGCTTTTTTATTGCCCTAATCTATTTAGCGATTAAAGCTTAACGAG
GTTATAGCCAAAGCTGGTTG

Product: MltD domain-containing protein

Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]

Alternate protein names: Murein hydrolase D; Regulatory protein dniR [H]

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MRKTFRQPHALAALVVAILMGQLSGCATTSAQTSPTEYAATLPDAQGNSEETAQPQHFETEVIDERYADVWEKIQHARTI
DVHDDAEVRKQRNFFDDKQKFMTQVTQRAEPFLYYIVSQLEARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGR
NFGLTINSAYDGRKDALASTDAVLDYLQHLHDTLGNDWINAVAGYNSGELVIKAAIDRNKAKGKPTDFWSLNIPARQVQT
VPKWLAFIQIIRAPSHYNLKVMPIANRPFLERLPAPNGVELSQIANAAGLTKAEFKTYNPGYRQSVIPSKGKYQIALPIE
NIGQYQENQHQLSAQTRYDSQSYIVKSGDSLGTIAAKFDISVKELKQANNLNSDRIKIGQELTLLTPMSSEDNTSTETPK
QSKAQTTSQAAKAKTSSKTADKPTAKASTYKVKSGDSLDKIARKNKVKLADLMKWNQLNAKSIIKSGQELKLSE

Sequences:

>Translated_474_residues
MRKTFRQPHALAALVVAILMGQLSGCATTSAQTSPTEYAATLPDAQGNSEETAQPQHFETEVIDERYADVWEKIQHARTI
DVHDDAEVRKQRNFFDDKQKFMTQVTQRAEPFLYYIVSQLEARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGR
NFGLTINSAYDGRKDALASTDAVLDYLQHLHDTLGNDWINAVAGYNSGELVIKAAIDRNKAKGKPTDFWSLNIPARQVQT
VPKWLAFIQIIRAPSHYNLKVMPIANRPFLERLPAPNGVELSQIANAAGLTKAEFKTYNPGYRQSVIPSKGKYQIALPIE
NIGQYQENQHQLSAQTRYDSQSYIVKSGDSLGTIAAKFDISVKELKQANNLNSDRIKIGQELTLLTPMSSEDNTSTETPK
QSKAQTTSQAAKAKTSSKTADKPTAKASTYKVKSGDSLDKIARKNKVKLADLMKWNQLNAKSIIKSGQELKLSE
>Mature_474_residues
MRKTFRQPHALAALVVAILMGQLSGCATTSAQTSPTEYAATLPDAQGNSEETAQPQHFETEVIDERYADVWEKIQHARTI
DVHDDAEVRKQRNFFDDKQKFMTQVTQRAEPFLYYIVSQLEARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGR
NFGLTINSAYDGRKDALASTDAVLDYLQHLHDTLGNDWINAVAGYNSGELVIKAAIDRNKAKGKPTDFWSLNIPARQVQT
VPKWLAFIQIIRAPSHYNLKVMPIANRPFLERLPAPNGVELSQIANAAGLTKAEFKTYNPGYRQSVIPSKGKYQIALPIE
NIGQYQENQHQLSAQTRYDSQSYIVKSGDSLGTIAAKFDISVKELKQANNLNSDRIKIGQELTLLTPMSSEDNTSTETPK
QSKAQTTSQAAKAKTSSKTADKPTAKASTYKVKSGDSLDKIARKNKVKLADLMKWNQLNAKSIIKSGQELKLSE

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Escherichia coli, GI1786405, Length=476, Percent_Identity=33.1932773109244, Blast_Score=258, Evalue=6e-70,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR010511
- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01476 LysM; PF06474 MLTD_N; PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 52509; Mature: 52509

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTFRQPHALAALVVAILMGQLSGCATTSAQTSPTEYAATLPDAQGNSEETAQPQHFET
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHH
EVIDERYADVWEKIQHARTIDVHDDAEVRKQRNFFDDKQKFMTQVTQRAEPFLYYIVSQL
HHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTINSAYDGRKDALAST
HHCCCCEEEEEEHHHHCCCCCHHHCCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH
DAVLDYLQHLHDTLGNDWINAVAGYNSGELVIKAAIDRNKAKGKPTDFWSLNIPARQVQT
HHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHH
VPKWLAFIQIIRAPSHYNLKVMPIANRPFLERLPAPNGVELSQIANAAGLTKAEFKTYNP
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHCCCCHHHCCCCCC
GYRQSVIPSKGKYQIALPIENIGQYQENQHQLSAQTRYDSQSYIVKSGDSLGTIAAKFDI
CCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECC
SVKELKQANNLNSDRIKIGQELTLLTPMSSEDNTSTETPKQSKAQTTSQAAKAKTSSKTA
CHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DKPTAKASTYKVKSGDSLDKIARKNKVKLADLMKWNQLNAKSIIKSGQELKLSE
CCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCCCEECCC
>Mature Secondary Structure
MRKTFRQPHALAALVVAILMGQLSGCATTSAQTSPTEYAATLPDAQGNSEETAQPQHFET
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHH
EVIDERYADVWEKIQHARTIDVHDDAEVRKQRNFFDDKQKFMTQVTQRAEPFLYYIVSQL
HHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EARNMPLELALLPIVESGYNPLAQANGPAGLWQMIPATGRNFGLTINSAYDGRKDALAST
HHCCCCEEEEEEHHHHCCCCCHHHCCCCHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH
DAVLDYLQHLHDTLGNDWINAVAGYNSGELVIKAAIDRNKAKGKPTDFWSLNIPARQVQT
HHHHHHHHHHHHHHCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHH
VPKWLAFIQIIRAPSHYNLKVMPIANRPFLERLPAPNGVELSQIANAAGLTKAEFKTYNP
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHCCCCHHHCCCCCC
GYRQSVIPSKGKYQIALPIENIGQYQENQHQLSAQTRYDSQSYIVKSGDSLGTIAAKFDI
CCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECC
SVKELKQANNLNSDRIKIGQELTLLTPMSSEDNTSTETPKQSKAQTTSQAAKAKTSSKTA
CHHHHHHHCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
DKPTAKASTYKVKSGDSLDKIARKNKVKLADLMKWNQLNAKSIIKSGQELKLSE
CCCCCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]

Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]

General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]