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The map label for this gene is 117921890

Identifier: 117921890

GI number: 117921890

Start: 4136514

End: 4137638

Strand: Direct

Name: 117921890

Synonym: Shewana3_3453

Alternate gene names: NA

Gene position: 4136514-4137638 (Clockwise)

Preceding gene: 117921889

Following gene: 117921894

Centisome position: 83.19

GC content: 50.04

Gene sequence:

>1125_bases
TTGGAACTACTTAAGATTGACTGCTTAGGCAAATCGCTGCGTTTGGAAGGCTCACTCGCAGGTTGGCAACAACTCTTTTG
GGACAACACCTTAGTCTCACAAAAAGCCGCATCGGTCGAAAATGGCGGCCTCAAAGTCCATGAATTTGAACTCACCCAGC
ACCAGAGCCAATTGGCCAGCGATACCGGCGAAACACAGGTTTTAGAACACAAAATCCAAGTACGCCTCGAGACCGACGTG
GTTTGGCAGCCGTTTCGATTCGATTACCGCCTGTTAGTCGATGAGGAAGTGATTGCCCAAGGCACTCGCACCGAGAAAGA
TATCGAGCGTCAAACCCCAGAAGTCCCCGTGACTAATCCACAAAAAATCAGTTTTGTCGGCTTAGCCTCCCTCGGCTTTA
AGCTGCTCAAGAGTGCCAAAGTGATTAAAGTGGTGCTCGCAGGTGCGAGTGTAGCGGCCTATTCTTGGCTATTTTCCTTC
CAATTTGCCTTGGCGCTTATCGCCTGTTTGGTCTTCCACGAATACGGCCATATCCGCGCGATGAAATATTTTGGGATGAA
AACCAAAGGGATATATCTCATCCCCTTTATGGGCGGACTCGCGCTGAGCGATGAAAAGATTAACACCCGCTGGCAGGATG
TGGTCATCTCGATTATGGGGCCAACCTTCGGCCTGTTGATGTCGATAGGCTCGCTTATCGCTTACCACATGACGGACAAT
GTCTTCTTTGCGGGGCTTGCGGCCTTTAACGCGCTACTTAACCTGTTTAATTTATTGCCGATTTTACCCCTCGATGGCGG
CCATATTTTAAAGAGCATTAGCTTCTCGATGAACAGCATCATGGGCTTAATCGCCTGTGTGATTGGCGCCGCCTTTGGGG
TGTATATCAGCTATACCTTGGGCCTTGCCCTGCTCGGTTTCCTATTGCTTATCGGTAGCTTAGAGATAGTGTTCGAGTGG
CGTACCCGCCATCAAAGCCACCTATTGCCGCTAGATAGATATGGGCAGATTTTCTCGACCATTTGGTATCTGGTCACCGT
TGCCGCCCTAGTCGGTATTATCTGGCACTTAGCGGGCACGGGCGATGATATGTTAAGCCTGCCACTGCATATTCTGCGCA
GCTAA

Upstream 100 bases:

>100_bases
TGTCATACACGGCTCAGGCCGTTTTGCCCAAAGCGATTGATATTTATATGCCAAATTATCGCTGGGCATCATTCGGATAC
ACATACAAACGGACCCTAAA

Downstream 100 bases:

>100_bases
TTACGACTCGCATTAAGATAAAAGCGAGATAATAAAAAACCGCGATAGCCTTAGGCATCGCGGTTTTTATTTATTAACTA
TTCAATTAGTTATCCGCTAA

Product: peptidase M50

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MELLKIDCLGKSLRLEGSLAGWQQLFWDNTLVSQKAASVENGGLKVHEFELTQHQSQLASDTGETQVLEHKIQVRLETDV
VWQPFRFDYRLLVDEEVIAQGTRTEKDIERQTPEVPVTNPQKISFVGLASLGFKLLKSAKVIKVVLAGASVAAYSWLFSF
QFALALIACLVFHEYGHIRAMKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLLMSIGSLIAYHMTDN
VFFAGLAAFNALLNLFNLLPILPLDGGHILKSISFSMNSIMGLIACVIGAAFGVYISYTLGLALLGFLLLIGSLEIVFEW
RTRHQSHLLPLDRYGQIFSTIWYLVTVAALVGIIWHLAGTGDDMLSLPLHILRS

Sequences:

>Translated_374_residues
MELLKIDCLGKSLRLEGSLAGWQQLFWDNTLVSQKAASVENGGLKVHEFELTQHQSQLASDTGETQVLEHKIQVRLETDV
VWQPFRFDYRLLVDEEVIAQGTRTEKDIERQTPEVPVTNPQKISFVGLASLGFKLLKSAKVIKVVLAGASVAAYSWLFSF
QFALALIACLVFHEYGHIRAMKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLLMSIGSLIAYHMTDN
VFFAGLAAFNALLNLFNLLPILPLDGGHILKSISFSMNSIMGLIACVIGAAFGVYISYTLGLALLGFLLLIGSLEIVFEW
RTRHQSHLLPLDRYGQIFSTIWYLVTVAALVGIIWHLAGTGDDMLSLPLHILRS
>Mature_374_residues
MELLKIDCLGKSLRLEGSLAGWQQLFWDNTLVSQKAASVENGGLKVHEFELTQHQSQLASDTGETQVLEHKIQVRLETDV
VWQPFRFDYRLLVDEEVIAQGTRTEKDIERQTPEVPVTNPQKISFVGLASLGFKLLKSAKVIKVVLAGASVAAYSWLFSF
QFALALIACLVFHEYGHIRAMKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLLMSIGSLIAYHMTDN
VFFAGLAAFNALLNLFNLLPILPLDGGHILKSISFSMNSIMGLIACVIGAAFGVYISYTLGLALLGFLLLIGSLEIVFEW
RTRHQSHLLPLDRYGQIFSTIWYLVTVAALVGIIWHLAGTGDDMLSLPLHILRS

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 41552; Mature: 41552

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLKIDCLGKSLRLEGSLAGWQQLFWDNTLVSQKAASVENGGLKVHEFELTQHQSQLAS
CCEEEEECCCCCEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHC
DTGETQVLEHKIQVRLETDVVWQPFRFDYRLLVDEEVIAQGTRTEKDIERQTPEVPVTNP
CCCCHHHHHHHHEEEEECCEEECCCCCCEEEEECHHHHHCCCCCHHHHHHCCCCCCCCCC
QKISFVGLASLGFKLLKSAKVIKVVLAGASVAAYSWLFSFQFALALIACLVFHEYGHIRA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
MKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLLMSIGSLIAYHMTDN
HHHCCCCCCCEEEEEECCCEEECCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
VFFAGLAAFNALLNLFNLLPILPLDGGHILKSISFSMNSIMGLIACVIGAAFGVYISYTL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLALLGFLLLIGSLEIVFEWRTRHQSHLLPLDRYGQIFSTIWYLVTVAALVGIIWHLAGT
HHHHHHHHHHHCCHHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDDMLSLPLHILRS
CCHHHHHHHHHHCC
>Mature Secondary Structure
MELLKIDCLGKSLRLEGSLAGWQQLFWDNTLVSQKAASVENGGLKVHEFELTQHQSQLAS
CCEEEEECCCCCEEECCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHC
DTGETQVLEHKIQVRLETDVVWQPFRFDYRLLVDEEVIAQGTRTEKDIERQTPEVPVTNP
CCCCHHHHHHHHEEEEECCEEECCCCCCEEEEECHHHHHCCCCCHHHHHHCCCCCCCCCC
QKISFVGLASLGFKLLKSAKVIKVVLAGASVAAYSWLFSFQFALALIACLVFHEYGHIRA
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
MKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLLMSIGSLIAYHMTDN
HHHCCCCCCCEEEEEECCCEEECCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
VFFAGLAAFNALLNLFNLLPILPLDGGHILKSISFSMNSIMGLIACVIGAAFGVYISYTL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLALLGFLLLIGSLEIVFEWRTRHQSHLLPLDRYGQIFSTIWYLVTVAALVGIIWHLAGT
HHHHHHHHHHHCCHHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDDMLSLPLHILRS
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]