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The map label for this gene is 117921888

Identifier: 117921888

GI number: 117921888

Start: 4134028

End: 4135719

Strand: Direct

Name: 117921888

Synonym: Shewana3_3451

Alternate gene names: NA

Gene position: 4134028-4135719 (Clockwise)

Preceding gene: 117921887

Following gene: 117921889

Centisome position: 83.14

GC content: 49.65

Gene sequence:

>1692_bases
ATGTTGGCCCCTGAACTTCTTGAGCTAAGCAGCGATAAAACCAAGGCGGAATTACGCTTAATTCCGAATGAGCACGGTCC
CATTACCCGTGATGATGTTATGCGTTTATTGTCCGTGCCAGAGTTCGCCACCCTATTCCCCCTCGAGCCTGCGATAGATA
AAGTTATCGCGCAAACCAATTCCCTATGCCATCAAGAAGATGGTAAATACGAGCTATTTGCCGTATTGGCAGAGCGCCGC
GATGGCAGCGTAAAAATCGAGCTCAGCCAAGATAAAATGCAAGCTACCATGATCTTAACCGCCCCTTGGGGAGGTAAAGC
CGTCGATTTACCCGAAATCCTCACGCAGCTTAAAAAAGACAATGTTTGCATGGGCTTAAGTAAGCTTAAGATCCAAACCT
TGCTGCAAAAAATGACCAAGTTAAAACCGGGTGAAAGCTGCCAGAGTGAAATCGCTCAAGGTAAGGCCGCGATCAATGGT
CAAAATGCGGTGCTGGAGCGTAAAGTCTCCATCGCCCGTGAACGCCTATTGCAGCCGCAGGAGCGGGAAGACGGCACTGT
GGATATGCGTAATCTCGGGGCGATGATCATGGTTAAGCCCAACGATCTGCTAATGATTAAGCATCCCGCGACCGAAGGGT
CTCCCGGCTACAACATTAAAGGCGAAGTCCTTAAGCAAAAACCGGGGAAAGATCTGGTATTACAACCCGGTACTGGTACC
GACTTCCACCCGAAAGATCCCAATAAACTCATCGCCACAGTGGCAGGCCAACCCGTTGAAACCCGTACAGGCATGAATGT
CGACGATGTGTTGCAGCTTAAAGATGTGGATATCAGTACCGGCCATATCAACTTTAAAGGCAGTATTTTAATCACGGGCG
ATGTACACGAAGGCATGATGGTTAAAAGTTCAGGCGATATTACCGTGATGGGCTTTGTCGATTCGGCAACCCTTGAAGCC
GATGGCGATATTACGGTGAGCAAGGGCGTGATTGGTCGCCAAGTCAGAGTGAATGAGTTCTCCACCAATATCACCGCTCA
GGGGCAGATCAGCGCCCAGTTCGTGCAATATTCCCAGTTAACAGCCAAGGGTAATATTCTGATCACTAAGCAATTACTCC
ACAGTAATACCAAAACCGCAGGCACGCTCACAGTTAGCGATCAGAGTGGCCGCCGTGGTGACTTAGTGGGTGGTGTCGTG
CATGCCGAAAAGGGCCTCACCGCCGTCGTGATAGGCGCAACTGCGGGCACCAAAACCGAAGTGTACTGCGCCATGGAACA
GGGCGAACTCAAACAAAATCTCAAGCAGCTTGAGGAGAGCGTGCATGCAATGGTGGTGGCGACGCTGGATATCGAGGCTC
GCCTGAAGAAACTGCCGCCGAAATCCGAATGGCAGAGCGACCCTATCATGATCGAACAGATCAAGATGATGCTCGATGAA
AAGAATCGCATCTTAGCTGAACGTTCTCGCGAAGAATTAGAGTTCGATAGCCTCAAGCAAGAAGTCGAAACCTATTACGA
CAAGTACCGTATCGATGTGATTAAGCATGTGTTCCTCAATGCCGAGTTCCATATTGGTCAAGCCAATCACAGAACCACCC
GCGAACACGGTACTTGCTCAATCACCAATCTGAATCAAGAGATTAACTTCGATTACAACGCCAAACCTAAGGCGCAAGCG
GCAAGCCATTAA

Upstream 100 bases:

>100_bases
ACCTTTTCATGCCGAAAAGGCTTCTTTGAGCAAAGTTTCTACTGTTATACTCAGGTTAGCTACTAAAACAAAAATAAAAC
AAATGGATAGGAAGTGCTCT

Downstream 100 bases:

>100_bases
CGGGGCAATCATCAACACCCGCTAAGGGTTCATTCCATTGAGTGAACTCTTAGCGTGAATGCTTTGCCACTCATCGTGAG
CCCCCATTTACGCAGACTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MLAPELLELSSDKTKAELRLIPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTNSLCHQEDGKYELFAVLAERR
DGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKDNVCMGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAING
QNAVLERKVSIARERLLQPQEREDGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGT
DFHPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMMVKSSGDITVMGFVDSATLEA
DGDITVSKGVIGRQVRVNEFSTNITAQGQISAQFVQYSQLTAKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVV
HAEKGLTAVVIGATAGTKTEVYCAMEQGELKQNLKQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMMLDE
KNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGTCSITNLNQEINFDYNAKPKAQA
ASH

Sequences:

>Translated_563_residues
MLAPELLELSSDKTKAELRLIPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTNSLCHQEDGKYELFAVLAERR
DGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKDNVCMGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAING
QNAVLERKVSIARERLLQPQEREDGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGT
DFHPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMMVKSSGDITVMGFVDSATLEA
DGDITVSKGVIGRQVRVNEFSTNITAQGQISAQFVQYSQLTAKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVV
HAEKGLTAVVIGATAGTKTEVYCAMEQGELKQNLKQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMMLDE
KNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGTCSITNLNQEINFDYNAKPKAQA
ASH
>Mature_563_residues
MLAPELLELSSDKTKAELRLIPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTNSLCHQEDGKYELFAVLAERR
DGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKDNVCMGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAING
QNAVLERKVSIARERLLQPQEREDGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGT
DFHPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMMVKSSGDITVMGFVDSATLEA
DGDITVSKGVIGRQVRVNEFSTNITAQGQISAQFVQYSQLTAKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVV
HAEKGLTAVVIGATAGTKTEVYCAMEQGELKQNLKQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMMLDE
KNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGTCSITNLNQEINFDYNAKPKAQA
ASH

Specific function: Unknown

COG id: COG1315

COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62032; Mature: 62032

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPELLELSSDKTKAELRLIPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTN
CCCCHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
SLCHQEDGKYELFAVLAERRDGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKD
HHHHCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCEECHHHHHHHHCCC
NVCMGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAINGQNAVLERKVSIARERLLQPQ
CEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCC
EREDGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGT
CCCCCCEEHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCC
DFHPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMM
CCCCCCCCCEEEEECCCCCCCCCCCCHHHEEEEECCEEECCEEEEEEEEEEEECCCCCEE
VKSSGDITVMGFVDSATLEADGDITVSKGVIGRQVRVNEFSTNITAQGQISAQFVQYSQL
EECCCCEEEEEEECCCEEECCCCEEEECCCCCCEEEEEECCCCEEECCCHHHHHHHHHHH
TAKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVVHAEKGLTAVVIGATAGTKTE
CCCCCEEEEHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE
VYCAMEQGELKQNLKQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMMLDE
EEEEECCCHHHHHHHHHHHHHHEEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGTCS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEE
ITNLNQEINFDYNAKPKAQAASH
EEECCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAPELLELSSDKTKAELRLIPNEHGPITRDDVMRLLSVPEFATLFPLEPAIDKVIAQTN
CCCCHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHH
SLCHQEDGKYELFAVLAERRDGSVKIELSQDKMQATMILTAPWGGKAVDLPEILTQLKKD
HHHHCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCEECHHHHHHHHCCC
NVCMGLSKLKIQTLLQKMTKLKPGESCQSEIAQGKAAINGQNAVLERKVSIARERLLQPQ
CEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCCC
EREDGTVDMRNLGAMIMVKPNDLLMIKHPATEGSPGYNIKGEVLKQKPGKDLVLQPGTGT
CCCCCCEEHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCC
DFHPKDPNKLIATVAGQPVETRTGMNVDDVLQLKDVDISTGHINFKGSILITGDVHEGMM
CCCCCCCCCEEEEECCCCCCCCCCCCHHHEEEEECCEEECCEEEEEEEEEEEECCCCCEE
VKSSGDITVMGFVDSATLEADGDITVSKGVIGRQVRVNEFSTNITAQGQISAQFVQYSQL
EECCCCEEEEEEECCCEEECCCCEEEECCCCCCEEEEEECCCCEEECCCHHHHHHHHHHH
TAKGNILITKQLLHSNTKTAGTLTVSDQSGRRGDLVGGVVHAEKGLTAVVIGATAGTKTE
CCCCCEEEEHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE
VYCAMEQGELKQNLKQLEESVHAMVVATLDIEARLKKLPPKSEWQSDPIMIEQIKMMLDE
EEEEECCCHHHHHHHHHHHHHHEEEEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
KNRILAERSREELEFDSLKQEVETYYDKYRIDVIKHVFLNAEFHIGQANHRTTREHGTCS
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEE
ITNLNQEINFDYNAKPKAQAASH
EEECCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA