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The map label for this gene is ppdD [C]

Identifier: 117921861

GI number: 117921861

Start: 4101941

End: 4102312

Strand: Direct

Name: ppdD [C]

Synonym: Shewana3_3424

Alternate gene names: 117921861

Gene position: 4101941-4102312 (Clockwise)

Preceding gene: 117921860

Following gene: 117921862

Centisome position: 82.5

GC content: 51.88

Gene sequence:

>372_bases
ATGAGCGCTTTACGTAAAGGGTTTACCCTGATTGAACTGATGATCGCCGTCGCCATTATTGGCATTCTTGCCGCCATTGC
GATTCCTTCGTTTAATGAGTACTTAAAACAGGGTCGACGCTTCGATGCGCAGCAATATCTCGTCAGTAGCGCCCAAGCGC
TAGAGCGCCATTATTCCCGCAACGGCCTGTATCCCGCTTCGCAGAGTTTAACCAACAATGCCTACTACAGTTTTAGCTAC
ACCCCCACCACGGATAAATTAGGTTTTAGCCTCAAGGCCGTCCCCACCAGTCGTCAGTCGGATTCCTGCGGCACCTTAAG
CCTCGACCATAAAGGTGTACGCGCCCCTGCAACCCATTGCTGGACCCACTAA

Upstream 100 bases:

>100_bases
ATAAATTATTATGACAACGTTGTCAAAACAATCAAAACAACAAGATAGCCATCGTAATCACGGACGATTCTATTCAGTTC
AATAACACAGGGAGGGGTGA

Downstream 100 bases:

>100_bases
GATGGCAAAGCGCACTAAAGCGGGGTTCACCTTAGTCGAATTACTGGTCGCTATCGCCATCATAGGTATCTTGGCGAGCA
TCGCCCTGCCTTCCTATCGG

Product: methylation site containing protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Fimbrial Protein Pilin

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSALRKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSRNGLYPASQSLTNNAYYSFSY
TPTTDKLGFSLKAVPTSRQSDSCGTLSLDHKGVRAPATHCWTH

Sequences:

>Translated_123_residues
MSALRKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSRNGLYPASQSLTNNAYYSFSY
TPTTDKLGFSLKAVPTSRQSDSCGTLSLDHKGVRAPATHCWTH
>Mature_122_residues
SALRKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSRNGLYPASQSLTNNAYYSFSYT
PTTDKLGFSLKAVPTSRQSDSCGTLSLDHKGVRAPATHCWTH

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13576; Mature: 13444

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
NGLYPASQSLTNNAYYSFSYTPTTDKLGFSLKAVPTSRQSDSCGTLSLDHKGVRAPATHC
CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCHHC
WTH
CCC
>Mature Secondary Structure 
SALRKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSR
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
NGLYPASQSLTNNAYYSFSYTPTTDKLGFSLKAVPTSRQSDSCGTLSLDHKGVRAPATHC
CCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCHHC
WTH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA