| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921819
Identifier: 117921819
GI number: 117921819
Start: 4052865
End: 4053155
Strand: Direct
Name: 117921819
Synonym: Shewana3_3382
Alternate gene names: NA
Gene position: 4052865-4053155 (Clockwise)
Preceding gene: 117921818
Following gene: 117921820
Centisome position: 81.51
GC content: 53.61
Gene sequence:
>291_bases ATGGCTTATCATCAATTTCGGACTCATAAAAAGTGGCCTTGGTTGCTGCTCAGTGTATGGCTACTGGTTACCCAGTGCTT TGCGCTGACCCATTACACCGAACACAGTCTGGAACATGAACACACCCATTGTATTGTCTGCGATTTTGGCCACGATACCA GTGCAAGTCCGGCGTCTATACCTGTGCTACCGCTGGATTTGCAACATGCCGATCATCGCGCCACCGCCGCCTATCACCCC CCCAGCTTAGCCCACATCCGCCATGTTGATGCGCGCGCCCCTCCCTTTTAG
Upstream 100 bases:
>100_bases CGACTCAGGTTGCCTGACGCAGGCGCATGCTTTAGCTCATTTCAACAGGGATATGCGCTTCCCGATAAGACTAACGGCTG AACCTTAACCAATAACAATA
Downstream 100 bases:
>100_bases AAAGCAAATTCAAAAACTTAAAAATTAATTTTTTGCTTATCTACAAGGAAAGGCACAATGAAACTTGCACTATCTTCAAT AGCGCTTGCGGTCGCGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MAYHQFRTHKKWPWLLLSVWLLVTQCFALTHYTEHSLEHEHTHCIVCDFGHDTSASPASIPVLPLDLQHADHRATAAYHP PSLAHIRHVDARAPPF
Sequences:
>Translated_96_residues MAYHQFRTHKKWPWLLLSVWLLVTQCFALTHYTEHSLEHEHTHCIVCDFGHDTSASPASIPVLPLDLQHADHRATAAYHP PSLAHIRHVDARAPPF >Mature_95_residues AYHQFRTHKKWPWLLLSVWLLVTQCFALTHYTEHSLEHEHTHCIVCDFGHDTSASPASIPVLPLDLQHADHRATAAYHPP SLAHIRHVDARAPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11033; Mature: 10901
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYHQFRTHKKWPWLLLSVWLLVTQCFALTHYTEHSLEHEHTHCIVCDFGHDTSASPASI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC PVLPLDLQHADHRATAAYHPPSLAHIRHVDARAPPF CEEECCCCCCCCCCCCCCCCCCCHHHEECCCCCCCC >Mature Secondary Structure AYHQFRTHKKWPWLLLSVWLLVTQCFALTHYTEHSLEHEHTHCIVCDFGHDTSASPASI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCC PVLPLDLQHADHRATAAYHPPSLAHIRHVDARAPPF CEEECCCCCCCCCCCCCCCCCCCHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA