| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is gltT [H]
Identifier: 117921800
GI number: 117921800
Start: 4031827
End: 4033149
Strand: Reverse
Name: gltT [H]
Synonym: Shewana3_3362
Alternate gene names: 117921800
Gene position: 4033149-4031827 (Counterclockwise)
Preceding gene: 117921801
Following gene: 117921798
Centisome position: 81.11
GC content: 51.4
Gene sequence:
>1323_bases ATGTCAAAACAAAGGTCATCAGCCCTAGGCCGGATCTGGTCTTCCTGGATGTCAGTGCCCCTGTGGCTGCAAATTTTCGT TGGTATGGTGTTAGGGATTGCGGTGGGCGTCAGCTTAGGTGAGCAGGCTTCATACCTGAAACCTATTGGCACCCTGTTTG TGAATACCATCAAGATGCTGATTGTGCCTTTAGTGTTTTGTTCATTGATTGTTGGTGTGACCTCAATGGAAGACACCGCC AAAATGGGCCGAATTGGGTTTAAATCCTTTGCGTTTTATCTGTGCACCACCGCGATTGCGATCAGCCTAGGTTTAGCCGT GGGCTATGTGGTGCAACCCGGTGCAGGCGTGCCTTTACTGCAACACGAAGCGGTACAAACGGCGAAAGAAGTGCCTTCGG TGATGCAAACCCTGATTGACATAGTCCCTACCAACCCCGTTGCCGCCTTGGCGAGTGGTCAAATTCTGCAAGTGATTGTG TTTGCCGTGGCCCTAGGGATTGCCTTGGTCTTGATTGGCGACCATGGTAAGCCTGCGATCAAGGTATTTGAAAGCCTTGC CGAGGCCATGTACAAACTCACCGACATGGTGATGAAGCTTGCGCCTTATGGGGTGTTTGGTCTGATGGCATGGGTCGCGG GCGAGTATGGCATCGACATGCTGTGGCCGCTGATTAAAGTGATTATTGCCGTATATATTGGCTGTATTATCCACGTGTTA GGCTTCTACAGCATAGTGCTGCGCCTATTTGCTAAGCTAAATCCACTGCATTTCTTCAAGGGGATCAGCAATGCGATGGC GGTGGCATTTACCACCTCAAGTTCGGCGGGTACCTTACCTGCAAGCATGAAATGTGCGAGCGAATATCTCGGGGTAAATA AGAAGATCTCTAGCTTTGTGCTGCCCTTAGGCACCACCATCAATATGGATGGCACCGCCCTATACCAAGGCGTGACCGCA CTGTTTGTGGCGCAGGCCTTTGGTATCGATTTAACTTGGGTCGACTATCTGACGATTATTTTAACCGCGACCTTAGCCTC AATCGGCACCGCGGGTGTGCCGGGCGCTGGCTTAGTGATGTTGACCTTAGTGCTCTCGACCGTGGGCTTGCCCTTAGAAG GCGTGGCCTTGATTGCGGGGATTGACCGTATTCTCGATATGGCGCGCACAGTGGTAAACGTTTCTGGCGACTTAGTGGCG ACGACTGTGATTGCTAAGTCGGAAGATGAGCTCGATGTTGAGCATTACAATGCCGATATGGTGCAGAGCGCTATGATTGC CGAACAAAATGCCGCGAGTGAAAGCGCCGCGACGAAAAGCTAA
Upstream 100 bases:
>100_bases TTTTATCCCTTATGTTAGACTCGGCGGCTGGCTAAGTTAAGTTAGTCCCGCCAAGGATAAGGCTCAGCCCTATCATCATT TAAAACTCAAGGTTATAAAC
Downstream 100 bases:
>100_bases TTCATCTAATAATAAAAAACCGCCAACTAGGCGGTTTTTTATTATCGAAGCTAGCTTATTTAAGCTGGCTTAAGACGAGG ACGGGCTTATCGTCGCTGCT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSKQRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTA KMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIV FAVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTA LFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVA TTVIAKSEDELDVEHYNADMVQSAMIAEQNAASESAATKS
Sequences:
>Translated_440_residues MSKQRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTA KMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIV FAVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTA LFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVA TTVIAKSEDELDVEHYNADMVQSAMIAEQNAASESAATKS >Mature_439_residues SKQRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTAK MGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLLQHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIVF AVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVLG FYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTAL FVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVAT TVIAKSEDELDVEHYNADMVQSAMIAEQNAASESAATKS
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=452, Percent_Identity=32.3008849557522, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI5032093, Length=399, Percent_Identity=35.0877192982456, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI40254478, Length=473, Percent_Identity=33.1923890063425, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI66773030, Length=450, Percent_Identity=32.2222222222222, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI169790839, Length=461, Percent_Identity=31.0195227765727, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI223468566, Length=280, Percent_Identity=37.8571428571429, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI223468564, Length=271, Percent_Identity=38.0073800738007, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI4827012, Length=325, Percent_Identity=35.0769230769231, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI194239697, Length=302, Percent_Identity=35.7615894039735, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI301601644, Length=191, Percent_Identity=36.1256544502618, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI262359914, Length=356, Percent_Identity=28.3707865168539, Blast_Score=127, Evalue=3e-29, Organism=Escherichia coli, GI1790514, Length=410, Percent_Identity=39.7560975609756, Blast_Score=281, Evalue=5e-77, Organism=Escherichia coli, GI1789947, Length=413, Percent_Identity=37.2881355932203, Blast_Score=244, Evalue=5e-66, Organism=Escherichia coli, GI1788024, Length=410, Percent_Identity=30, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1789473, Length=286, Percent_Identity=27.972027972028, Blast_Score=98, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71996953, Length=460, Percent_Identity=35.4347826086957, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71983099, Length=487, Percent_Identity=34.0862422997947, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71983106, Length=483, Percent_Identity=34.1614906832298, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI193206505, Length=494, Percent_Identity=30.9716599190283, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17537407, Length=465, Percent_Identity=29.8924731182796, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI193206654, Length=418, Percent_Identity=30.3827751196172, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17541374, Length=418, Percent_Identity=30.622009569378, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI24583025, Length=438, Percent_Identity=30.8219178082192, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI17137668, Length=438, Percent_Identity=30.8219178082192, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24583023, Length=438, Percent_Identity=30.8219178082192, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI281360483, Length=471, Percent_Identity=29.9363057324841, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI17137666, Length=471, Percent_Identity=29.9363057324841, Blast_Score=146, Evalue=3e-35, Organism=Drosophila melanogaster, GI281360481, Length=471, Percent_Identity=29.9363057324841, Blast_Score=145, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 46436; Mature: 46304
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKML CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMEDTAKMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGKPAI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH KVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFV HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH LPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVM HCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEDELDVEHYNADM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHCCHHH VQSAMIAEQNAASESAATKS HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKQRSSALGRIWSSWMSVPLWLQIFVGMVLGIAVGVSLGEQASYLKPIGTLFVNTIKML CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH IVPLVFCSLIVGVTSMEDTAKMGRIGFKSFAFYLCTTAIAISLGLAVGYVVQPGAGVPLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QHEAVQTAKEVPSVMQTLIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGKPAI HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHH KVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHVL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH GFYSIVLRLFAKLNPLHFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFV HHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHH LPLGTTINMDGTALYQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVM HCCCCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LTLVLSTVGLPLEGVALIAGIDRILDMARTVVNVSGDLVATTVIAKSEDELDVEHYNADM HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHCCHHH VQSAMIAEQNAASESAATKS HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]