| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921798
Identifier: 117921798
GI number: 117921798
Start: 4031051
End: 4031284
Strand: Reverse
Name: 117921798
Synonym: Shewana3_3360
Alternate gene names: NA
Gene position: 4031284-4031051 (Counterclockwise)
Preceding gene: 117921800
Following gene: 117921796
Centisome position: 81.08
GC content: 40.17
Gene sequence:
>234_bases ATGACAGATACCATTAAAAGCACTATGAATTTATTGAAGTTTTTACATTGGTTAGGTGTTTTGATGTTAGTTTGTGGACT TGGGGTCTATATGTTGACCCAATGGAGTCTAGAAATCAGCGGTATGTTACTGATCTCAAGCCTCATTGGTTTAGGACTCG TATTGATGTCACCCTATCCCGTGGTGCTGTTTATCCAATGGGCGAAGCGTCAGGATGAGCTTCCTAAAGATTAA
Upstream 100 bases:
>100_bases TGCGCTTAATAGAAATGTTTGTTTTAACATTGTCTCAGTTCCTTTTTCCGTATTCATGGCCATAGTGTACAAGTTTAGCG GGAGATAAAAAGAGGTTTAT
Downstream 100 bases:
>100_bases TCCCGCGTAAAAGCTAGAGCTCGGACGAGTCGGCGGCGGGATTATCATACTGCTCGGCATCGAACTTGGGCGCTTGATTT GCTTGGTTTGGTTCAGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTDTIKSTMNLLKFLHWLGVLMLVCGLGVYMLTQWSLEISGMLLISSLIGLGLVLMSPYPVVLFIQWAKRQDELPKD
Sequences:
>Translated_77_residues MTDTIKSTMNLLKFLHWLGVLMLVCGLGVYMLTQWSLEISGMLLISSLIGLGLVLMSPYPVVLFIQWAKRQDELPKD >Mature_76_residues TDTIKSTMNLLKFLHWLGVLMLVCGLGVYMLTQWSLEISGMLLISSLIGLGLVLMSPYPVVLFIQWAKRQDELPKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8712; Mature: 8581
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIKSTMNLLKFLHWLGVLMLVCGLGVYMLTQWSLEISGMLLISSLIGLGLVLMSPYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VVLFIQWAKRQDELPKD HHHHHHHHHHCCCCCCC >Mature Secondary Structure TDTIKSTMNLLKFLHWLGVLMLVCGLGVYMLTQWSLEISGMLLISSLIGLGLVLMSPYP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VVLFIQWAKRQDELPKD HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA