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The map label for this gene is 117921781

Identifier: 117921781

GI number: 117921781

Start: 4012248

End: 4012991

Strand: Reverse

Name: 117921781

Synonym: Shewana3_3343

Alternate gene names: NA

Gene position: 4012991-4012248 (Counterclockwise)

Preceding gene: 117921784

Following gene: 117921780

Centisome position: 80.71

GC content: 52.02

Gene sequence:

>744_bases
ATGCAGGTGGGGGGCTGTTGGTTTGACCGTGAGCGTGGCTTACTCGTCGAACAGGCTCGTGATGAATCTTGGCACCTTCC
CCGTGCCGAGTTGCAAGTGTTGAGCCTGTTGGTTGAACATCAAGGCAAACTGGTCTCCAAGCATGAGCTGAAGACTGGCG
ATGGGGCGCATCCTCCTCTGACTGACACTTCGTTAGCGCGGGCGGTCTTTATGATCCGCTCCTTCCTCGGACCCCAATAT
GAGGGGCTGATTGAAACCGTCAAGGGGCAAGGCTATCTGCTGCACTGTACCCAAGGGCAAAAGCTAAAAAGCTTGCGTTA
TCCTAGGCTGCAATCCTTACCTTGGTGGAGTGTGTTGCTGGTTTTTGGATTTATGCTCGCGATTTCAGGATTTTACCTTA
GCCGCATCGACCACAGCGTACCGACTCAGCCTTTGCTCTCCACCGATTTGCCCTTAGCCTCGGGTCAACATATTCGACTG
CATTTGTATGCCAACTCGAAAACCAACAATACCCTATTGTTTGAGTTAGGCGACCGCTTAGGCCAAGGGTTGAGTCGCTG
CGGCCATAGTGATTGGTCCGAAGTGTATTCCTCACTCTCCCACGATAAACAGGTGCTCAACATTACTATGCGGGGTTATA
AACTCGGGCAATCGGTGATCCGCAACTTGAAGATCAGTGACTTCAGGCGGCCGAAGGAATTTATCGATGTGAACTGGCTA
CAGGAGGTCGGGATCTGTGGCTAA

Upstream 100 bases:

>100_bases
AAAATTAATTATTTAGCCCCTTGGGTTAACGGGATCACAGTAATCATTAGCAGGCTTGCATAGACTTAATTCGATGATTT
TATAGGTTGGAGTTTGAATT

Downstream 100 bases:

>100_bases
GTGGCTTAAATGGACAATAAATCTGACTATACTCTCGGCGCTAATCGTCGCCTGCGGGGTGATTTACCTGCAATCTGTCT
CCAATAAGGCGGTGATCTTA

Product: lysine decarboxylase transcriptional regulator, CadC

Products: NA

Alternate protein names: Response Regulator Receiver Protein; Transcriptional Regulator; Transcriptional Regulator-Related Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQVGGCWFDRERGLLVEQARDESWHLPRAELQVLSLLVEHQGKLVSKHELKTGDGAHPPLTDTSLARAVFMIRSFLGPQY
EGLIETVKGQGYLLHCTQGQKLKSLRYPRLQSLPWWSVLLVFGFMLAISGFYLSRIDHSVPTQPLLSTDLPLASGQHIRL
HLYANSKTNNTLLFELGDRLGQGLSRCGHSDWSEVYSSLSHDKQVLNITMRGYKLGQSVIRNLKISDFRRPKEFIDVNWL
QEVGICG

Sequences:

>Translated_247_residues
MQVGGCWFDRERGLLVEQARDESWHLPRAELQVLSLLVEHQGKLVSKHELKTGDGAHPPLTDTSLARAVFMIRSFLGPQY
EGLIETVKGQGYLLHCTQGQKLKSLRYPRLQSLPWWSVLLVFGFMLAISGFYLSRIDHSVPTQPLLSTDLPLASGQHIRL
HLYANSKTNNTLLFELGDRLGQGLSRCGHSDWSEVYSSLSHDKQVLNITMRGYKLGQSVIRNLKISDFRRPKEFIDVNWL
QEVGICG
>Mature_247_residues
MQVGGCWFDRERGLLVEQARDESWHLPRAELQVLSLLVEHQGKLVSKHELKTGDGAHPPLTDTSLARAVFMIRSFLGPQY
EGLIETVKGQGYLLHCTQGQKLKSLRYPRLQSLPWWSVLLVFGFMLAISGFYLSRIDHSVPTQPLLSTDLPLASGQHIRL
HLYANSKTNNTLLFELGDRLGQGLSRCGHSDWSEVYSSLSHDKQVLNITMRGYKLGQSVIRNLKISDFRRPKEFIDVNWL
QEVGICG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27996; Mature: 27996

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVGGCWFDRERGLLVEQARDESWHLPRAELQVLSLLVEHQGKLVSKHELKTGDGAHPPL
CCCCCEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
TDTSLARAVFMIRSFLGPQYEGLIETVKGQGYLLHCTQGQKLKSLRYPRLQSLPWWSVLL
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHHH
VFGFMLAISGFYLSRIDHSVPTQPLLSTDLPLASGQHIRLHLYANSKTNNTLLFELGDRL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHH
GQGLSRCGHSDWSEVYSSLSHDKQVLNITMRGYKLGQSVIRNLKISDFRRPKEFIDVNWL
HHHHHHCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCHHHH
QEVGICG
HHCCCCC
>Mature Secondary Structure
MQVGGCWFDRERGLLVEQARDESWHLPRAELQVLSLLVEHQGKLVSKHELKTGDGAHPPL
CCCCCEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
TDTSLARAVFMIRSFLGPQYEGLIETVKGQGYLLHCTQGQKLKSLRYPRLQSLPWWSVLL
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCHHHHHH
VFGFMLAISGFYLSRIDHSVPTQPLLSTDLPLASGQHIRLHLYANSKTNNTLLFELGDRL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHH
GQGLSRCGHSDWSEVYSSLSHDKQVLNITMRGYKLGQSVIRNLKISDFRRPKEFIDVNWL
HHHHHHCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHCCCHHHCCCCHHHHCHHHH
QEVGICG
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA