| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921765
Identifier: 117921765
GI number: 117921765
Start: 3989082
End: 3989501
Strand: Reverse
Name: 117921765
Synonym: Shewana3_3327
Alternate gene names: NA
Gene position: 3989501-3989082 (Counterclockwise)
Preceding gene: 117921766
Following gene: 117921760
Centisome position: 80.24
GC content: 46.19
Gene sequence:
>420_bases ATGGAATATCGGGTCAGCACAGCGCAAACGGAAATGGATTTTGAGCTTATCCATGGTTTTATTTCCAACAGTTATTGGGC GCAGGGTATGCCGCCTGAACTCTTGCGAAAGGCACTTGGCAACAGTTTATGTTTTGGGGTGTTTGATAAGGATAATCAAC AGCTTGCTTTTGCGCGCATGATTACTGATAAAGCCACCTTTGCCTACCTTGCCGATGTGTTTGTTCTCGAATCCCACCGA GGCTTAGGGTTAAGTAAAATGATGATGGCAGCGATTATGGAACATCCTGATCTGCAAGGATTAAGACGCATAATGCTCGC CACCCGCGATGCCCATGGACTCTACGCCCAGTTTGGTTTCAAAGCGGTCGATACACCAGAAACCTTAATGCAAATTAGGC TTGAGAATGCTTACCTGTAG
Upstream 100 bases:
>100_bases ACTCTGGCGGGCGCCTTGTATTCGCTAGCTAAATTAGTGTTATTTGCCATGGCTTTTATGTTATTGGTAAGCGTCAATAA CAGCTAAATCGAGGCGAGTG
Downstream 100 bases:
>100_bases AACAGGATTGTTAACACTAAAACAAAAAGCCAGCATCAGCTGGCTTTTTCGTGAGGGGAATAATCGTTAACGATTAAGCC GCTTTAGTTTCTGTGGTCTC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase; GCN5-Related N-Acetyltransferase Protein; Histone Acetyltransferase HPA2/Related Acetyltransferase; Acetyltransferase Domain-Containing Protein; N-Acetylglutamate Synthase; Acetyltransferase GNAT Family Protein; GCN5 N-Acetyltransferase; Acetyltransferase Family Protein; Acetyltransferase GCN5-Related; Acetyltransferase Gnat Family; Spermine/Spermidine Acetyltransferase; N-Acetyltransferase Gnat Family Protein; GCN5-Related Protein N-Acetyltransferase
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MEYRVSTAQTEMDFELIHGFISNSYWAQGMPPELLRKALGNSLCFGVFDKDNQQLAFARMITDKATFAYLADVFVLESHR GLGLSKMMMAAIMEHPDLQGLRRIMLATRDAHGLYAQFGFKAVDTPETLMQIRLENAYL
Sequences:
>Translated_139_residues MEYRVSTAQTEMDFELIHGFISNSYWAQGMPPELLRKALGNSLCFGVFDKDNQQLAFARMITDKATFAYLADVFVLESHR GLGLSKMMMAAIMEHPDLQGLRRIMLATRDAHGLYAQFGFKAVDTPETLMQIRLENAYL >Mature_139_residues MEYRVSTAQTEMDFELIHGFISNSYWAQGMPPELLRKALGNSLCFGVFDKDNQQLAFARMITDKATFAYLADVFVLESHR GLGLSKMMMAAIMEHPDLQGLRRIMLATRDAHGLYAQFGFKAVDTPETLMQIRLENAYL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15803; Mature: 15803
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRVSTAQTEMDFELIHGFISNSYWAQGMPPELLRKALGNSLCFGVFDKDNQQLAFARM CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHH ITDKATFAYLADVFVLESHRGLGLSKMMMAAIMEHPDLQGLRRIMLATRDAHGLYAQFGF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCC KAVDTPETLMQIRLENAYL CCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MEYRVSTAQTEMDFELIHGFISNSYWAQGMPPELLRKALGNSLCFGVFDKDNQQLAFARM CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHH ITDKATFAYLADVFVLESHRGLGLSKMMMAAIMEHPDLQGLRRIMLATRDAHGLYAQFGF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCC KAVDTPETLMQIRLENAYL CCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA